Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02078 ATGATGTGCCTCAGGGTGATGGCAGCGACAGAGAAGTCTGCGACGGTGATGGAAGCGGAGGTGCGTTCGGTGACGTGCTACTGTTGCGGGCTAACTGAGGATTGCACTGCGCTTTACATTGACGGCGTGAAGGAGAGGTACCAGGGTCGTTGGATTTGTGGGCTGTGTGCTGAAGCAGTGAAGGAAGAGGGTTTGAAGTTGAAAGATGTTGATGTTAACACAGATGAAGCACTGAAGCGCCACATGAAGTTCAGATCTTTTGCTTCTAGTCCTCCCAAAAAACCCACCCAAGACTTGATTCTTGCAATGAAACACCTTCTTTTTCGATCTTTGGATTCTCCCAGGAAGGATTCTTTGACCTGTTCGCCACTGGCTAGTTCCCACAAATGTTTTTCACCTGGATCCTCGAAGGGAGAGCCACAAGAGATAATCACCAGGGAGTAG 444 0.4932 MMCLRVMAATEKSATVMEAEVRSVTCYCCGLTEDCTALYIDGVKERYQGRWICGLCAEAVKEEGLKLKDVDVNTDEALKRHMKFRSFASSPPKKPTQDLILAMKHLLFRSLDSPRKDSLTCSPLASSHKCFSPGSSKGEPQEIITRE 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02078 147 PANTHER OS01G0745000 PROTEIN 10 132 IPR012876 -
Vian4g02078 147 MobiDBLite consensus disorder prediction 128 147 - -
Vian4g02078 147 Pfam Protein of unknown function (DUF1677) 21 109 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02078 Vian-Chr4 37651895 37652338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02078 - - gmx:100817156 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02078 4 37651895 37652338 Vian4g02078 4 37651895 37652338 ECH
Vian4g02078 4 37651895 37652338 Vian7g00492 7 12181483 12218575 ECH
Vian1g00491 1 4645814 4646251 Vian4g02078 4 37651895 37652338 ECH
Vian9g00377 9 3605605 3606087 Vian4g02078 4 37651895 37652338 ECH