Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02048 ATGGCTAGTTCCTCAAGAGCCGTCTCTGCATCCCTTTTGTTCTTTTTCCTTCTCCTTGGATTCTCAGCAGCTAAGGAACTATTAGTTGGAGGCAAGATTGATGCTTGGAAGATTCCATCTTCAGAAGTAGATTCTCTCAATCAATGGGCTGAAAAGTCTCGTTTCAGAGTTGGCGACTATTTGGTGTGGAAATTCGAAAGTGGGAAGGACTCAGTGTTGGAAGTAACAAGGGAGGAATATGGTAATTGCAGCACCTCCAACCCAATCAAAGAGTACAGTGATGGGAATACTAAGGTGATGCTAGAACGTCCTGGGCCATTCTACTTCATCAGTGGAGCAAAGGGGCACTGTGAGAAGGGCCAAAAGTTGGTTGTGGTTGTCATTTCTCCAAAGCACACATTCCGTGCAATTTCTCCGGCACCTTCTCCGGCGGAGTTTGAGGCTCCAGCTGTTGCTCCTACTAGTACTGCTACAACCTTGCAAGTTGCTCTTCTAACCTCAACTCTCGGAGTGTTTGCCATGACTTTGGTGGTCGCGTTCTTTTAA 546 0.4652 MASSSRAVSASLLFFFLLLGFSAAKELLVGGKIDAWKIPSSEVDSLNQWAEKSRFRVGDYLVWKFESGKDSVLEVTREEYGNCSTSNPIKEYSDGNTKVMLERPGPFYFISGAKGHCEKGQKLVVVVISPKHTFRAISPAPSPAEFEAPAVAPTSTATTLQVALLTSTLGVFAMTLVVAFF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02048 181 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Vian4g02048 181 PANTHER BLUE COPPER PROTEIN 26 148 IPR039391 GO:0009055
Vian4g02048 181 FunFam Early nodulin-like protein 1 24 132 - -
Vian4g02048 181 CDD OsENODL1_like 25 128 IPR041846 -
Vian4g02048 181 Gene3D - 23 132 IPR008972 -
Vian4g02048 181 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Vian4g02048 181 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02048 Vian-Chr4 37298821 37299638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02048 11 171 Phytocyanin Superfamily AT2G25060 56.790 9.23e-62 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02048 - - gmx:100305551 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02048 4 37298821 37299638 Vian4g02048 4 37298821 37299638 ECH
Vian7g00525 7 12817190 12818145 Vian4g02048 4 37298821 37299638 PCT