Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02037 ATGTCCCTTGATTCCGAAGCAAATCTTTCTTCCATGGAACCAACTTGTGTCGACACTTCTCTCAACCTTAACGTTATTCCCTCTTCACACACGGACATCGCGGGAGAATTTTTGGTTGAAGAGTTGCGGCGTTTAAACTGTGAGAACAAGATGCTAACTGCGACGCTGAACCACGTATACGAGAACTGTCTTGCTTTGCAGAAACATTTGAGTGAGTTTAACAGACTGAAGAAAGCAAATTTTGACAAAGAAGAAACAGCATCGCTGAAAAGAAAGGTTGACAGTGAGAATTGCGCGAATCTGTTTTGCGTCAACGCCCTCACAGAGTGCAGCAGTGAGGAAGAGACGTTCAAAAAGCCTAAGCAAAGTACCACCCCAAAGGTTCACAAAGTTTTTGTACGGACAGATGCATCTGATACCAGCTTGTATGTGAGGGACGGATATCAGTGGAGAAAATATGGTCAAAAAGTGACCAGAGATAACCCTTCTCCTAGGGCTTACTTCAAGTGTTCCTATGCTCCGGGCTGTCCAGTGAAGAAGAAGGTGCAGAGAAGCGTGGAGGATCGAAGTGTGTTGGTGACAACGTACGAAGGAGAACACAACCATGGTGAACATCAAACGGAGACATCGGGGAATTCAGGGAAAAGTGAAAGTGGGGAAGCGCTAGAATTGGTCCAGTCAAGAGTGGTTGACATGAATGGGCAAAAGTCATTGGTCCAGCAGTTTTTAGTTCAACAAATGGCTACATCTTTGACCAGAGATCCTAATTTCACTGCAGCACTTGCTTCTGCCATCTCGGGAAATCTACATCATACTTCTACGCCAAAACGTTGA 834 0.4508 MSLDSEANLSSMEPTCVDTSLNLNVIPSSHTDIAGEFLVEELRRLNCENKMLTATLNHVYENCLALQKHLSEFNRLKKANFDKEETASLKRKVDSENCANLFCVNALTECSSEEETFKKPKQSTTPKVHKVFVRTDASDTSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSYAPGCPVKKKVQRSVEDRSVLVTTYEGEHNHGEHQTETSGNSGKSESGEALELVQSRVVDMNGQKSLVQQFLVQQMATSLTRDPNFTAALASAISGNLHHTSTPKR 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02037 277 ProSiteProfiles WRKY domain profile. 146 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian4g02037 277 FunFam WRKY transcription factor 40 129 206 - -
Vian4g02037 277 MobiDBLite consensus disorder prediction 197 220 - -
Vian4g02037 277 Pfam WRKY DNA -binding domain 146 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian4g02037 277 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 234 269 IPR044810 GO:0003700
Vian4g02037 277 SUPERFAMILY WRKY DNA-binding domain 141 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian4g02037 277 SMART WRKY_cls 144 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian4g02037 277 Gene3D WRKY domain 127 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02037 Vian-Chr4 37088282 37089517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02037 17 271 WRKY Transcription Factor Family AT1G80840 43.986 9.85e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian4g02037 WRKY 5.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02037 - - gmx:100127373 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00516 7 12710361 12712007 Vian4g02037 4 37088282 37089517 PCT