Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian4g02017 | ATGAAAAAGAACCTTCTTTTTGTGTTTATTCTTCTTCTGCATTGCGTTGCTGCTGCAGACCCTCCTGCTTCCTCTCCTCAACTTCCACCTGATCTCTCTCCAGGGGAGGGGCAGCATCACCTGCACAAGAAAATGCTAGTAGCTATTGTCGTAGCCACCATTTCACTTGCTGCACTCATTTTCGGTTTCTTATGTTTCTGGATTTATCACACTAAGTGTCCAACAAAATCCAAAACCAAAAAGGTTCAAACTCCTGGTCCAGATGCAGAGAGGGGGATCACCCTTGCGCCGTTTCTGAGCAGATTCAGTTCCGTCAAAATTGTTGGTATGAAGGAGTCTGTGCCGATAGTTGATTATAAGCAAATAGAAAAAACGACCAATAATTTTGAGGAAAGTAACATCTTGGGCGAGGGTGGTTTTGGATGTGTTTACAAGGCTCGGTTGGATCATAATCTGGATGTTGCAGTAAAAAAACTACACTGCGAGACTCAACATGCGGAAAGAGAATTCGAGAATGAGGTGAAATTGTTAAGCAAAATTCAGCATCCGAATATAATCTCCTTACTGGGTTGTAGCGCTGATGGTGACACGAGGTTTATTGTTTATGAGTTGATGCAAAATGGATCATTGGAAGCTCATTTACATGGACCTACTCATGGCTCGGCATTGACATGGCACATGAGGATGAAGATTGCTCTTGACACAGCAAGAGGACTAGAATATCTGCATGAGCACTGCTACCCTGCAGTGATCCACAGAGACATGAAATCTTCCAATATTCTCTTAGATGCAAACTTCAATGCCAAGCTGTCTGATTTTGGTCTTGCCATAACTGATGGGTCCCAAAGCAAGAAGAACATTAAACTATCGGGTACCTTAGGATACGTAGCACCGGAGTATCTTCTAGATGGTAAATTGAGTGATAAAAGTGATGTGTATGCTTTTGGGGTTGTGCTATTGGAGCTTCTATTAGGAAGGAGGCCAGTGGAAAAACTGGCACCGACGCAATGCCAGTCTATTGTCACATGGGCCATGCCACAGCTCACAGACAGAGCCAAGCTTCCAAACATTGTGGATCCAGTGATTAAGGACACGATGGATCATAAACACTTGTACCAGGTTGCTGCTGTAGCTGTGCTATGCGTGCAACCAGAGCCTAGTTATCGCCCTCTCATCACAGATGTTCTTCACTCACTTATCCCTCTTGTTCCCATTGAGCTCGGAGGAACACTGAGAGTTTCGCAAGTGAGGCAGCATGCCTCTCTTGCTGTGAATTACCGTCTTTGA | 1287 | 0.4444 | MKKNLLFVFILLLHCVAAADPPASSPQLPPDLSPGEGQHHLHKKMLVAIVVATISLAALIFGFLCFWIYHTKCPTKSKTKKVQTPGPDAERGITLAPFLSRFSSVKIVGMKESVPIVDYKQIEKTTNNFEESNILGEGGFGCVYKARLDHNLDVAVKKLHCETQHAEREFENEVKLLSKIQHPNIISLLGCSADGDTRFIVYELMQNGSLEAHLHGPTHGSALTWHMRMKIALDTARGLEYLHEHCYPAVIHRDMKSSNILLDANFNAKLSDFGLAITDGSQSKKNIKLSGTLGYVAPEYLLDGKLSDKSDVYAFGVVLLELLLGRRPVEKLAPTQCQSIVTWAMPQLTDRAKLPNIVDPVIKDTMDHKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPIELGGTLRVSQVRQHASLAVNYRL | 428 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian4g02017 | 428 | ProSitePatterns | Protein kinases ATP-binding region signature. | 135 | 158 | IPR017441 | GO:0005524 | |
Vian4g02017 | 428 | CDD | STKc_IRAK | 135 | 402 | - | - | |
Vian4g02017 | 428 | SMART | serkin_6 | 129 | 400 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian4g02017 | 428 | Gene3D | Phosphorylase Kinase; domain 1 | 95 | 204 | - | - | |
Vian4g02017 | 428 | Gene3D | Transferase(Phosphotransferase) domain 1 | 205 | 404 | - | - | |
Vian4g02017 | 428 | PANTHER | OS01G0750732 PROTEIN | 39 | 403 | - | - | |
Vian4g02017 | 428 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 250 | 262 | IPR008271 | GO:0004672|GO:0006468 | |
Vian4g02017 | 428 | Pfam | Protein kinase domain | 129 | 397 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian4g02017 | 428 | ProSiteProfiles | Protein kinase domain profile. | 129 | 400 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian4g02017 | 428 | SUPERFAMILY | Protein kinase-like (PK-like) | 107 | 399 | IPR011009 | - | |
Vian4g02017 | 428 | FunFam | Protein kinase superfamily protein | 96 | 204 | - | - | |
Vian4g02017 | 428 | FunFam | probable receptor-like protein kinase At1g80640 | 205 | 404 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian4g02017 | Vian-Chr4 | 36819825 | 36822845 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian4g02017 | 36 | 403 | Receptor kinase-like Gene Family | AT3G58690 | 43.085 | 5.83e-97 | 294 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-X | Vian4g02017 | Pkinase | 6.5e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian4g02017 | - | - | gmx:100784795 | 701.434 |