Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01953 ATGATGCACATGACCTTTTACTGGAGCCGGAAGGTGAATCTCCTGATTGATTCCTGGCGGACCGAGGATTGGACCCATTATCTTCTCACCCTTCTTGCCTGCCTCATGGTTTCCGCTTTCTATCAGTTAATTGAGAATTGCAGAATTCGCCTCAAGCTCATTGGTGCTGGAAAGCCCTTCCCGTCAGAGATACAGACCCCTCTGTTGCAGCGGAAGCTCACCGGAAACGGAGACAAGTTGGGCGTGAAGGTCGCTGGGGCGATTCTCTTTGGGCTGAGCTCGGTCATAGGGTATTTGTTGATGTTATCGGTTATGTCCTTCAACGGAGGGGTCTTTGTGGCCATAGTCGTGGGTCTCGTTGTTGGTTACTTTTTCTTCAGGAACGAGGGTGAAGATTCCATTTTAGTAGACACTTCTTGCGCCTGTGCTTAA 432 0.4977 MMHMTFYWSRKVNLLIDSWRTEDWTHYLLTLLACLMVSAFYQLIENCRIRLKLIGAGKPFPSEIQTPLLQRKLTGNGDKLGVKVAGAILFGLSSVIGYLLMLSVMSFNGGVFVAIVVGLVVGYFFFRNEGEDSILVDTSCACA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01953 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 132 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vian4g01953 143 Pfam Ctr copper transporter family 4 51 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vian4g01953 143 Pfam Ctr copper transporter family 83 126 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01953 Vian-Chr4 36152137 36152568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01953 1 143 Inorganic Solute Cotransporters AT5G20650 46.667 6.08e-45 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01953 K14686 - gmx:100805457 238.81