Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01949 ATGTCTTCGGTAATATCATCATCCTCGTCTCGTGTTTTTGATGCCATCAATGAATGTGTGTTTCTGGTTCAATCAGACTCGGTTGAAGTTCAAGAGAAAGCTCTTCAAATGCTGGCTTCCATCACGAAGGTCAGTTCCCAAAACAGAACCTCACTGGCTCAAACAGAAGGAGCCATTCCAACAATAGCCACACTAACAAACTCTTCCTCTCCCATCATCCAAACACTTTCTTTGTTAACCCTCTTCAACCTATCCCTCAACCCAGATCTGAAGCAATCTCTTGCTGACATGGAAACCATTTACTACCTCAACTCCCTCATCACCAACTCATCATTTTCCCTCGACTCTTCCAAACTGGCCTCCTCATTGGTTTGCAGCTTGGCCATGCATGACAAAAACAAGGCCAAGTTTGGGGTGGCAGGCACAGTTCAGTTGCTAGTGAAAGCAGTTGAAGGGTGTCACGGTTCTGATGCGAACCACCTTCTGAGTTCTCTTGCTGAGCTTGTTCATTTTCATGGAAACTGCACTCTGGCAGTGCGAGCCGGGGCAGTGGCAGTGCTGCTTAAGGTGGTGAAGGGTACTGATAACGAGGACTTGGCAGGAACTTCTCTCGCTGTTCTCAGTCTCCTTGCGAGGTTTGATGAAGGGTTGAATGGTTTGAAGAAAACGGATGAGATAATTAGAGTAATGTTGAATGTGTTGAAGGGTAGGTCTCTGTTGAGCAAGGAGGGTGCTGCTGATATCCTTATTCGTCTTTTTGATGACAGTGAAGATTGTGTGACTGAGGCTTTGATGTTGCCAGAATTTTCAACCGTCTTGGCTGATCTTTGTGTGAGGGGTTCGGTGAGAGTTCGTGACAAGGCGGATTTGTTGATGAAGAAGATGGCACAGGTGAGCTTGGATTCTGATATGGAAGTATGCTCCCTCCATGGTTAA 936 0.4626 MSSVISSSSSRVFDAINECVFLVQSDSVEVQEKALQMLASITKVSSQNRTSLAQTEGAIPTIATLTNSSSPIIQTLSLLTLFNLSLNPDLKQSLADMETIYYLNSLITNSSFSLDSSKLASSLVCSLAMHDKNKAKFGVAGTVQLLVKAVEGCHGSDANHLLSSLAELVHFHGNCTLAVRAGAVAVLLKVVKGTDNEDLAGTSLAVLSLLARFDEGLNGLKKTDEIIRVMLNVLKGRSLLSKEGAADILIRLFDDSEDCVTEALMLPEFSTVLADLCVRGSVRVRDKADLLMKKMAQVSLDSDMEVCSLHG 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01949 311 PANTHER U BOX DOMAIN-CONTAINING 20 293 - -
Vian4g01949 311 Gene3D - 122 306 IPR011989 -
Vian4g01949 311 Gene3D - 6 121 IPR011989 -
Vian4g01949 311 SUPERFAMILY ARM repeat 14 296 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01949 16 288 U-box Gene Family AT1G23030 25.632 1.27e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01949 - - vra:106761892 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01949 4 36094061 36094996 Vian4g01949 4 36094061 36094996 ECH