Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01945 ATGACATGTCCAAAGAGTGGTAAGAATGTTTTGAAATTGGTGCAGGTTAAAGAATTGGAGAGTTCAAAGGAATCTAGGAACAATGGTGGTGCGGAAGAAAGTTTTGATGAGAAACAGAGATATGAATATCTACCAGTCGAGGTTCATGAGCAAAGAGTGACGAACCTTTTGCAGTCTGTCCTGGTTGGTGTCTCAATCCTAGCCATGCCTGTAATCAGAGAGATACCAACCTCAGTTCTATGGGGATATTTTGCTTACATGGCAATTGATAGTCTCCCAGGAAATCAGTTCTGGGAAAGGATATTGCTCCTCTTCATCACCCCAGGCCGCCGTCACAAAATTTTCGAAGGTTTTCATGCCTCTTTTCTGGAGAAAGTACCATTCAAGACCATAGTTACATTTACACTCATACAGTTAGGATATTTTTTAATATGTTACGGGGTAACTTGGATTCCTTTTGTTGGAATACTGTTCCCTGTACCATTCTTCCTTCTCATATTCATAAGAGAGCGCTTGCTTCCAAAGATATTCAAGCCTAACCATCTCGAAGAACTAGATGCTTCTGGGTATGAGGAAATTGCTGGAGTTCCACCTGCTATGGATATGGAGTCAGATACTGATACTGGAGGAAGTGAAGAGGACTTCTGCTATGCAGAGATATTAGATGAGATGACAACCAACAGGGGAGAGTTTGTCCTAGAGAAGATGCTGTCTGAAGATGGTGAAATCTGTCTGCGCATAGCATTGCTTAGGATGCAGAAAGGGTTTGATATAATAGTGTTCCTCAAGATTATAGTTTTGTAG 804 0.4129 MTCPKSGKNVLKLVQVKELESSKESRNNGGAEESFDEKQRYEYLPVEVHEQRVTNLLQSVLVGVSILAMPVIREIPTSVLWGYFAYMAIDSLPGNQFWERILLLFITPGRRHKIFEGFHASFLEKVPFKTIVTFTLIQLGYFLICYGVTWIPFVGILFPVPFFLLIFIRERLLPKIFKPNHLEELDASGYEEIAGVPPAMDMESDTDTGGSEEDFCYAEILDEMTTNRGEFVLEKMLSEDGEICLRIALLRMQKGFDIIVFLKIIVL 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01945 267 PANTHER ANION EXCHANGE PROTEIN 14 194 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vian4g01945 267 Pfam HCO3- transporter family 46 137 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01945 Vian-Chr4 36066475 36067682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01945 16 231 Antiporters AT4G32510 57.500 5.30e-83 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01945 K24194 - gmx:100792745 300.441