Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01944 ATGGAAGCACCGTTTAAGGGAATAATTGAAGATTTCAAGGGAAGATTTCAGTGCTATAAACAAGATTGGATTTGTGATATCTGTTCTGGTCCTAGAACCCCTGCACTGGGTAGAGAGCTCTTTCTGGCTGCGCTTAGTTGGGTTTGTGTTTGGACGGGATTCTTCCTGGTGGTGCTTGCAATTTTTAATGCTTGCTCAATTATCTCAAGGTTTACAAGAATTGCTGGGGAGTTATTTGCCATGCTCATAACTGTTCTTTTCTTTCAAGAGGCTGTAAAGGTGTTGCTTTCTCTTCCTAGCAAAACAGATTGTAAATTTGGTGCTGCAGAACTCAACATGACTGAGGAATTTCAATTCCGCTGGTTGTATACAAATGGATTACTTGCAATCATTTTCAGTATTGGATTACTTTTCACTGCCCTAATAAGCAGAAGAGCAAGAGCGTGGAAATATGGAACAGGGTGGCTACGAGGATTTATAGCAGATTATGGGATTCCACTGATGGTAGTGTTATGGACTGCACTATCTTATGCTGTACCAAGAAAAGTTCCAGATGGCATTCCTAGAAGGCTTTTTTCTCCTCTACCGTGGGAACCTGAATCACTCTATCACTGGACAGTAGTGAAGGATATGTGGAAGGTACCCCCAGCTTTTGTATTTGGGGCAAGTATTCCAGCTCTGATGATAGCAGGCTTATACTTTTTTGATCACAGTGTAGCTGCGCAGATGACACAACAGAAAAAATTTAACCTTCAAAAACCATCAGCCTACCACTATGATGTTTTCCTGCTTGGAATAATGACTCTGATTTGTGGGCTCCTTGGTCTTCCTCCTTCAAATGGAGTCCTTCCACAGTCCCCCATGCATACAAAGAGTTTAGCAGTTCTTAAGAAAAAGGTAAGGATCATCTATTGCGTCAGAACTCCTGGTTCTTAA 936 0.4167 MEAPFKGIIEDFKGRFQCYKQDWICDICSGPRTPALGRELFLAALSWVCVWTGFFLVVLAIFNACSIISRFTRIAGELFAMLITVLFFQEAVKVLLSLPSKTDCKFGAAELNMTEEFQFRWLYTNGLLAIIFSIGLLFTALISRRARAWKYGTGWLRGFIADYGIPLMVVLWTALSYAVPRKVPDGIPRRLFSPLPWEPESLYHWTVVKDMWKVPPAFVFGASIPALMIAGLYFFDHSVAAQMTQQKKFNLQKPSAYHYDVFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKKKVRIIYCVRTPGS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01944 311 PANTHER ANION EXCHANGE PROTEIN 26 300 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vian4g01944 311 Pfam HCO3- transporter family 41 109 IPR011531 GO:0006820|GO:0016020
Vian4g01944 311 Pfam HCO3- transporter family 126 300 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01944 Vian-Chr4 36062860 36064757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01944 34 308 Antiporters AT1G15460 65.468 4.31e-133 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01944 K24194 - gmx:100787412 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01944 4 36062860 36064757 Vian4g01944 4 36062860 36064757 ECH