Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01939 ATGAGTTGTGTGATGATGATAGTTTGTGATTGCAGGTTGTTGGTGGTGGCAAATGCTGGAGATTGTCGAGCTGTGCTGTGCCGTCGTGGGAAAGCAGTTGAAATGTCAAGAGATCATAAACCGAGTTGCAACAAAGAAAGGAAGCGAATAGAGGCTTCTGGGGGGTATGTGTACGATGGATATCTTAACGGGCAACTGAATGTTGCTCGAGCACTTGGTGACTGGCACATGGAAGGAATGAAGAGCAAAGATGGTGGACCACTGACTTCAGAACCCGAACTTATGAGTACAAAACTGACGAGCGAGGACGAATTTCTGATCATAGGATGTGATGGGATTTGGGATGTATTCAGGAGCCAAAATGCAGTGGATTTCGCCAGGCGCAGGCTCCAGGAGCATAATGACCCAACCTTGTGCAGTAAGGATCTGGTTGATGAGGCTTTAAAGAGAAAGAGTGGAGACAATTTGTCTGCAGTTGTGATTTGCTTCCAGCAGCAACCTCCTCCAAACTTGGTGGCCCCTCGCTCTAGAGTGCACCGGAGCTTCTCTGCTGAAGGTTTGAAGGAGTTGCAGAGTTTCCTGGATAGCTTGGGTAATTGA 600 0.4783 MSCVMMIVCDCRLLVVANAGDCRAVLCRRGKAVEMSRDHKPSCNKERKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKSKDGGPLTSEPELMSTKLTSEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPTLCSKDLVDEALKRKSGDNLSAVVICFQQQPPPNLVAPRSRVHRSFSAEGLKELQSFLDSLGN 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01939 199 SMART PP2C_4 1 161 IPR001932 -
Vian4g01939 199 ProSiteProfiles PPM-type phosphatase domain profile. 1 163 IPR001932 -
Vian4g01939 199 Gene3D - 1 180 IPR036457 -
Vian4g01939 199 SUPERFAMILY PP2C-like 2 165 IPR036457 -
Vian4g01939 199 PANTHER PROTEIN PHOSPHATASE 2C 3 161 IPR015655 GO:0004722|GO:0006470
Vian4g01939 199 Pfam Protein phosphatase 2C 6 155 IPR001932 -
Vian4g01939 199 CDD PP2Cc 3 163 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01939 Vian-Chr4 36011933 36012532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01939 12 199 PP2C-type Phosphatase Gene Family AT2G25620 80.729 2.47e-113 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01939 K14803 - gmx:100804558 370.933