Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01925 ATGGGTGTGGATTACTATGATGTGTTGAAGGTTAACAGAAATGCTACCGAGGATGATGTGAAGAAATCATACAGAAAGTTGGCCATGAAATGGCACCCTGATAAGAACCCCAACAACAAAAAGGAAGCTGAAGCCAATTTCAAACAGATTTCAGAGGCTTACGAGGCAAGAAACCTTTCATGCTGTGTTCTTTTTAATGTGCTGAGTGACCCTCAGAGAAGGTTGGTTTATGATCAGTATGGAGAGGAGGGGTTGAAAGATAAGCCACCGGACGAACCATCAAATGGGTTCAACCCCAGAAATGCAGAGGATATTTTTGCAGAGTTCTTTGGAAGTAGCCCTTTTGGATTTGGATCATCTGGGCCAGGGAAATCTAAGAGATTCCCCTCTGATGGAGGGACTACAACATTTGGTGGATTTAGTGCAAAGGATAATAATTTTCGATCATATAGTACTGGACGGGGGAATGTGCTAAAGAAGCCACTGCCTGTGGAATCCAAACTGCCTTGCTCTTTGGAGGAATTGTACACTGGCTCTACTAGGAAAATGAAGATCTCAAGGAAGACCGTGGATGCTAACGGATGGACAGTTCCGGAAACAGAGATATTGACCATTGATGTGAAGCCGGGTTGGAAGAAAGGGACAAAGATTACGTTCCCTGAGAAAGGGAATCAAGAACCAAATCAATTGCCAGCAGACCTTGTGTTTGTGATTGACGAGAAGCCTCATGATGTGTTCAAGAGAGACGGGAATGACCTTATTGTGAACAAAAGGGTATCATTGGCTGAGGCCATTGGAGGAACCACAATAAACCTCAACACGCTTGATGGACGAATTTTAAATGTTCAAGTCACTGACATTGTGAGTCCTGGATACGAGATGAATATTGCAAAAGAAGGGATGCCAATAACAAAGGAGCCTGGTCATAGGGGTGATCTCAAGATCAAATTTGATGTCAGTTTTCCTACAAAGTTGACCCCAGAGCAACGAGCAGGACTCAAGCGAGCACTCACAAGTTGA 1020 0.4382 MGVDYYDVLKVNRNATEDDVKKSYRKLAMKWHPDKNPNNKKEAEANFKQISEAYEARNLSCCVLFNVLSDPQRRLVYDQYGEEGLKDKPPDEPSNGFNPRNAEDIFAEFFGSSPFGFGSSGPGKSKRFPSDGGTTTFGGFSAKDNNFRSYSTGRGNVLKKPLPVESKLPCSLEELYTGSTRKMKISRKTVDANGWTVPETEILTIDVKPGWKKGTKITFPEKGNQEPNQLPADLVFVIDEKPHDVFKRDGNDLIVNKRVSLAEAIGGTTINLNTLDGRILNVQVTDIVSPGYEMNIAKEGMPITKEPGHRGDLKIKFDVSFPTKLTPEQRAGLKRALTS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01925 339 Gene3D DnaJ domain 3 120 IPR036869 -
Vian4g01925 339 FunFam Dnaj homolog subfamily b member 160 241 - -
Vian4g01925 339 Gene3D - 242 339 - -
Vian4g01925 339 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 337 - -
Vian4g01925 339 SMART dnaj_3 3 73 IPR001623 -
Vian4g01925 339 CDD DnaJ_C 164 325 - -
Vian4g01925 339 FunFam DNAJ heat shock family protein 242 337 - -
Vian4g01925 339 Pfam DnaJ C terminal domain 164 322 IPR002939 -
Vian4g01925 339 ProSiteProfiles dnaJ domain profile. 4 81 IPR001623 -
Vian4g01925 339 Pfam DnaJ domain 4 78 IPR001623 -
Vian4g01925 339 CDD DnaJ 4 70 IPR001623 -
Vian4g01925 339 SUPERFAMILY Chaperone J-domain 3 119 IPR036869 -
Vian4g01925 339 Gene3D - 163 241 - -
Vian4g01925 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 245 331 IPR008971 GO:0006457|GO:0051082
Vian4g01925 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 164 244 IPR008971 GO:0006457|GO:0051082
Vian4g01925 339 PRINTS DnaJ domain signature 24 39 IPR001623 -
Vian4g01925 339 PRINTS DnaJ domain signature 73 92 IPR001623 -
Vian4g01925 339 PRINTS DnaJ domain signature 42 62 IPR001623 -
Vian4g01925 339 PRINTS DnaJ domain signature 6 24 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01925 Vian-Chr4 35815097 35816693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01925 5 80 C2H2 Transcription Factor Family AT1G74250 35.000 6.99e-08 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01925 4 35815097 35816693 Vian4g01925 4 35815097 35816693 ECH