Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01869 ATGACGACCACGGAGTCCGATCTCGATAACGACTTTCCTAATCTCGACGAGCTCCGGTATCTGAACCTCGCCGGAACCGATGTCTTCGCCGCTTTCCAAAATCTATTACCGGATGCCATGACTTCATTTTCAACTTTTGGTAGTCCAGTGTCAGCTAATAAACCAGAGGGCTGGAAGAATCATACGAAAGGAGCCACAAGTGGTTCTTCTGAGCCATCTGATGAAGATGGTCCTTGTGAACAGAGCACGAATTCAGTTGAATTGAAACGTCTTAGAAGGAAGGTTTCTAATCGCAATTCTGCCAGAAGGTCAAGAAGAAGAAAACAGGCGCAGTTGGCTGACCTAGAGTTGCAGGTTGAAAAACTGAAAGTGGAAAACGCAACCCTATACAAGCAGTTCAATGATGCTAGTCAACATTTTCGTGAGGCTGACACGAATAACCGGGTGCTGAAATCAGACGTAGAAGCTTTGAGAGCTAAGGTGAAGTTAGCAGAGGACATGGTGACTAGAGGCTCTTTCACTACGTTAAACAATCAGCTTCTTCCCACACAGTGTCAAGTGAACACACCCCCGCCACTGAATACGACCAATCTCCGCCGCATGGCGCATGTTTCGCCAACCATCACTGTGCATGGAAATGATGGCTCATACAACGATGCCACAGTTTGTGTACAGAATTCAGACCTTGGAAACTTGGACATGAATTTCAACGACATGAACAATGTGAACGGAGTTATGAGCGATGGCATGAGTTGTGGGAGTATTTGGCCACCTTTTTAG 780 0.4628 MTTTESDLDNDFPNLDELRYLNLAGTDVFAAFQNLLPDAMTSFSTFGSPVSANKPEGWKNHTKGATSGSSEPSDEDGPCEQSTNSVELKRLRRKVSNRNSARRSRRRKQAQLADLELQVEKLKVENATLYKQFNDASQHFREADTNNRVLKSDVEALRAKVKLAEDMVTRGSFTTLNNQLLPTQCQVNTPPPLNTTNLRRMAHVSPTITVHGNDGSYNDATVCVQNSDLGNLDMNFNDMNNVNGVMSDGMSCGSIWPPF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01869 259 Gene3D - 88 144 - -
Vian4g01869 259 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 92 107 IPR004827 GO:0003700|GO:0006355
Vian4g01869 259 SMART brlzneu 85 149 IPR004827 GO:0003700|GO:0006355
Vian4g01869 259 SUPERFAMILY Leucine zipper domain 88 139 IPR046347 GO:0003700|GO:0006355
Vian4g01869 259 PANTHER BASIC LEUCINE ZIPPER 63 44 247 - -
Vian4g01869 259 MobiDBLite consensus disorder prediction 60 85 - -
Vian4g01869 259 Coils Coil 98 132 - -
Vian4g01869 259 Coils Coil 147 167 - -
Vian4g01869 259 MobiDBLite consensus disorder prediction 49 86 - -
Vian4g01869 259 FunFam BZIP transcription factor 87 138 - -
Vian4g01869 259 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 150 IPR004827 GO:0003700|GO:0006355
Vian4g01869 259 Pfam bZIP transcription factor 87 137 IPR004827 GO:0003700|GO:0006355
Vian4g01869 259 CDD bZIP_plant_GBF1 106 141 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01869 Vian-Chr4 35184686 35188921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01869 48 257 bZIP Transcription Factor Family AT5G24800 48.848 1.08e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian4g01869 bZIP_1 1.1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01869 K25784 - gmx:780555 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01869 4 35184686 35188921 Vian4g01869 4 35184686 35188921 ECH