Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01817 ATGGTAACATCTCCACTTCAGAAGATGTCTAACAACCTCAAGTTCAATCCCTTTAAGAAGCATTTGCTAATAATTTTCACGATGATTCTTTCTCTCCCCTTCAATGTTCAATCTCAAGACAGAGAAGAGGAAGAACAGAACCTGCCACAACCCCCTCAAACCCTTCATCCAAGCAAGGGGATCGTGATAGCAGTGCTCGCCACCATGTTTGCCATTACAACTATCTTACTTTTATATGTCAAGTTCTGTCGAGTCAACGGTCGCCAACATCTTACCCGAAACTCAAATCTCCAAAACTTTCAGGGCCGATCTCGATCAAGTTCAAGAGTTTCTGGTATTGACAAAGAAGTGAGAGAGCCTTCTCATAGAGGGTCATCGAGAAGAGGCTTTAATGACGCGGGGAACTGCACGAAACAAGAACTGTTTATTGGTGATGGCAGTGGCGGTGGTGGTGGCACAAAGTGGGACACAGATGTTCGTGTGACAAACCTTAAAATAGTTATCTCTGACGTTTTCACGAGGAGCAGGTGGAGTGATCTTAACTCTTCGGACCTGTTGTCGTTGAACAGCGAGATGCTTAATGATGTCAGCAGCAGGAGATTATGTTCGAGTTCTTTGGAATCCACCGAAGACAGCGGAAAGGTTGACGGAACTTGGCGTTTTAAGGAGGAAGAAAAGTGGTTTACGGAAGTGAATCCTGGTGAGAAGAGGTGCATGTCTGAGATTACCAATGTTCCGAGGTTTGCAGAAATGGGGAAGGAGAATAGGATCGGAGAAAGTGTTTGGTTGCCAATTGCACGAAGAACTATCCAATGGATTGCAAAACAAGAAAGGAATCCGGGTGAATTAGAACCAAAAACTCTACCCTCAAATGTTTGA 879 0.4437 MVTSPLQKMSNNLKFNPFKKHLLIIFTMILSLPFNVQSQDREEEEQNLPQPPQTLHPSKGIVIAVLATMFAITTILLLYVKFCRVNGRQHLTRNSNLQNFQGRSRSSSRVSGIDKEVREPSHRGSSRRGFNDAGNCTKQELFIGDGSGGGGGTKWDTDVRVTNLKIVISDVFTRSRWSDLNSSDLLSLNSEMLNDVSSRRLCSSSLESTEDSGKVDGTWRFKEEEKWFTEVNPGEKRCMSEITNVPRFAEMGKENRIGESVWLPIARRTIQWIAKQERNPGELEPKTLPSNV 292
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01817 292 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 162 278 - -
Vian4g01817 292 MobiDBLite consensus disorder prediction 109 126 - -
Vian4g01817 292 MobiDBLite consensus disorder prediction 96 130 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian4g01817 Vian-Chr4 34475516 34476694 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01817 163 278 C3H Transcription Factor Family AT4G28890 33.939 3.37e-13 67.4