Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01792 ATGCCTGAGCTGCGTACCCGAACTCGCAGAAACCAGCTCGTAGACAACGCAAACGCTATCCCGATCATTCAGCCAGCCTCGCCGGCGACCGCCAGAGCTCGACGGAGGAAGACATCCGCCGCGGCTGCCCGAACGCGGAGGAATCGGAGACAGAACGATGCGATCGCCGCCGCCGATGAAATCGTGAACGATTACGCTGAGGAAGACATGGATGAAGACGATAGCCGTGGCCGTAGCGCAGATAAGGTTCCGGGAGCTGAAGATGAAGGCAGCACTGCCCCTCTTCCGGAGAAGGTTCAAGTTGGTGGTTCTCCTTTGTATAGAACTGAGAGAAAACTTGGGAAGGGAGGATTTGGGCAAGTGTATGTTGGTCGGCGGGTAGGAGTTACGAATTCTAGCGAACGGACTGGTGCCGGTGCTGTTGAGGCGGTAGTCATGGTGTTCCACGAGTACATTTCAAGGGACGGCAAGGTAATGGATATGCTTGGTCCCAGTCTGTGGGATGTTTGGAATAACAACTCTCACACCATGTCTACTGAAATGGTAGCATGTATTGCAATTGAGGCTATCTCCATATTAGAGAAGATGCATTCTAGAGGGTATGTGCATGGTGATGTAAAGCCTGAGAATTTTTTGCTTGGACCCCCAGGAACTCCAGATGAAAAGAAATTGTTTCTGGTTGATCTTGGGGGCACAGTTCGTTATGCTAGTGTGCATGCTCATCTTGGTAGAACAGGTAGCAGGAGAGATGACTTGGAATCTCTTGCTTACACTCTTGTCTTCCTTCTTCGGGGTCGGCTTCCCTGGCAAGGATATCAGGGGGAAAATAAAGGGTTTCTTGTCTGCAAAAAAAAGATGGCCACCTCTCCAGAAACATTGTGTTGCTTTTGTCCTCAACCTTTCCGGCAGTTTGTTGAATATGTAGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAATATATATCCCTCTTTGATGGAATCGTGGGCCCAAATCCAGATATCAGGCCAATAAACACCGAGGGTGCTCAGAAGCTTATATGTCAGGTTGGCCATAAGAGGGGGCGTTTGACCATGGAAGATGATGATGATGAACAGCCTAAAAAAAAGGTTCGAATGGGAATGCCTGCTACACAGTGGATTAGTGTTTACAATGCTCGTCGACCAATGAAGCAAAGGTATCATTATAATGTAGCTGACGCGCGGTTAGCCCAACACATTGATAAAGGGAATGAAGATGGTTTATTTATCAGCAGTGTGGCTTCTTGTACTAATCTTTGGGCACTCATTATGGATGCTGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCTTCCTGCTTTCTTCATAAGGAATGGATTATGGAACAATGGGAAAATAATTATTATATTAGTGCCATAGCCGGAGCTCATAATGGATGCTCATTGGTTGTAATGTCTAAAGGTACCCAGTACGTACAACAATCCTATAAAGTCAGTGATTCGTTTCCGTTTAAGTGGATCAACAAAAAATGGAGAGAAGGATTTTATGTAACTGCTATGGCCACTGCTGGCACTAGATGGGCAATTGTTATGTCACGTGGGGCTGGTTATTCTGATCAGGTTGTGGAACTTGATTTCTTGTATCCCAGTGAAGGTATTCATCGGAGGTGGGATAATGGTTATCGCATCACCTCAACGGCTGCAACATGGGACCAGGCTGCTTTTGTTCTTAGTGTCCCAAGAAGAAAACCAACTGATGAAACTCAGGAGACACTCCGTACATCTGCTTTTCCTAGTGCTCATGTTAAGGATAAATGGGCAAAGAATCTCTATATTGCATCTATTTGCTATGGGAGAACATTTGCTACTTTTGAGTACCTTACCATTATGATTGTTTCAATGAAGAAAGTTGTGGATTTTGGTTGGTCCTTGCAATGTTATGTTGCCCAGAGCAACCTATATGGTCAAGGAAATCAGAAGCTGTTCAAGGAACTGGTTTTTTTGGAACTATTTGCCGTTAGAACCTATGATGCTTTCCAGCCCTCAATCACTATGCTGGCTCTAGTGGATTATCTTTCACATCCTGTCCACTAA 2079 0.4536 MPELRTRTRRNQLVDNANAIPIIQPASPATARARRRKTSAAAARTRRNRRQNDAIAAADEIVNDYAEEDMDEDDSRGRSADKVPGAEDEGSTAPLPEKVQVGGSPLYRTERKLGKGGFGQVYVGRRVGVTNSSERTGAGAVEAVVMVFHEYISRDGKVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLICQVGHKRGRLTMEDDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADARLAQHIDKGNEDGLFISSVASCTNLWALIMDAGTGFTAQVYELSSCFLHKEWIMEQWENNYYISAIAGAHNGCSLVVMSKGTQYVQQSYKVSDSFPFKWINKKWREGFYVTAMATAGTRWAIVMSRGAGYSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQAAFVLSVPRRKPTDETQETLRTSAFPSAHVKDKWAKNLYIASICYGRTFATFEYLTIMIVSMKKVVDFGWSLQCYVAQSNLYGQGNQKLFKELVFLELFAVRTYDAFQPSITMLALVDYLSHPVH 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01792 692 SMART serkin_6 107 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian4g01792 692 ProSiteProfiles Protein kinase domain profile. 107 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian4g01792 692 PANTHER CASEIN KINASE-RELATED 107 582 - -
Vian4g01792 692 Gene3D Transferase(Phosphotransferase) domain 1 87 334 - -
Vian4g01792 692 MobiDBLite consensus disorder prediction 1 105 - -
Vian4g01792 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Vian4g01792 692 SUPERFAMILY Protein kinase-like (PK-like) 107 330 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01792 Vian-Chr4 34207490 34213379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01792 139 326 MAP Kinase Kinase Kinase AT5G50180 24.645 7.92e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01792 - - gmx:100779382 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01792 4 34207490 34213379 Vian4g01792 4 34207490 34213379 ECH