Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01784 ATGTCCAAAGTGCCCCTCTTTATTTCATTTCATTTCTTCCTGTTATTCAGCGTCGCTGTACCCTCTCGGGTAATTTCAGAAACTGAACAAACAATCCTACTCACTCTCAAACGTGAACTGGGAGACCCACCGTCGCTCCGATCATGGAAACCGTCGCCGTCTGCGCCGTGCGATTGGACGGAGATTGGATGCAACAGCGGCGGCGCCGTCACGAAGCTAGTCCTCTCCAGCAAGGGCATCACCACCACCAAGAGCCTCCCTTCCACAATCTGCAACCTCACACACCTACTCGAGCTTAACCTCTTCAACAACTTTATTGCCGGCGAGTTTCCGACAACCTTGTACGAATGCTCCAACCTCCGGTACCTCAACCTGTCGCAGAACTACCTCGCAGGAGCGATCCCCGCCGACGTGGACCGCCTCAAAACCCTCACTTTCCTCGACCTCACCGCCAACTCCTTCTCCGGAGAGATCCCGGCCGCGATCGGGAACCTGCTGGAACTGCAAACGCTGTATCTTTCCGCAAACAACTTCGAGGGAACCGTCCCCAGGGAAATCGGAAACTTGTTGAACCTCGAATTTTTGGGTTTGGGTTATAATCTTAAACTCGCGCCGTGGGAGTTCCCGTTGGAGTTTAGGAAATTAAGAAATTTGAGGTCTATGTATATGCCGCAGTGTAACTTGATCGGAGAGATTCCAGAATATTTCGGGAATATTTTCACGAACCTCGAACGGTTGGATTTGGGGAAGAACAAGATATCAGGGAGCATTCCGAGGAATTTGTTCTCGCTGAGGAAGTTGAGGTTCTTGTACCTGTTCAGTAACAGATTGTCGGGTGCGATTCCTAGTGATACGATGCAGTGTTTGGAATTAATCGAGCTTGATTTCGCGAAGAATAATTTGACGGGTTCCATACCGCCAGAGTTTGGAAAATTAAAGAACTTGAGTACCTTGCACTTGTACGAAAATCACTTAGTCGGTGAGATTCCCGTAAGTTTAAGCCAAATTCCTAATCTCATCTATTTCAGGGTTTTTAGCAATAACTTGAGTGGAACACTGCCTCCAGAACTAGGCTTGCATTCCAAGCTTACAGTGTTTGAGGTTTCTAAGAACCAGCTCAGTGGTGGGTTGCCGGAACATTTATGTGCAGGTGGTGCCCTTATTGGTGTGGTTGCATTTTCCAACAATTTTAGTGGGGTTTTGCCTGAGTGGATTGGGAATTGTCCTTCTCTAGCCACGGTTCAGCTTTATAATAACAAGTTTTCGGGTGAGGTTCCTTTGGGTTTGTGGACTATGAATAACCTTTCGTCCTTGATTTTGAGCAACAACTCTTTTTCTGGGCCTCTTCCGAGTCAAGTGTTTTGGAATATGACGAGGATTGAGATCGCCAACAACAACTTCTCGGGTGGGATATCTGTTGGGATTACTTCGGCCAAAAATCTGATGTTTCTTGATGCCAGAAACAACATGCTTTTGGGTGAAATTCCAAGGGAATTGACTCAACTTTCACAGCTTACTGCTCTCATGCTGGATGGTAACCAACTTTCGGGTGCACTTCCATCTGAGATTATTTCGTGGCAATCACTGAACATTTTGACACTATCACGAAACAAACTTTCTGGCCAGATTACCACGGCTATTACTGCTCTTCCCCGCCTGGCTTACCTGGACTTGTCTCAAAACGACATATCAGGTGAAATACCTCCTCAGTTTGATAGGTTGCGGTTTGTTTTCCTCAACTTGTCCTCCAACCGGCTATCTGGGAAAATCCCTGATGAGTTCAATAACCTCGCATTTGAAAATAGTTTCTTGAACAATCCTCATCTATGTGCTTACAATCCAAACGTCCACCTTGACAACTGCTTGACCAAAACCGCGTCAGCGGCACCACAGTCGAGCAATTCGTCTTCGAAATCACTGGCCCTGGTTCTGGCTGCCACTGCGGTTGTGTTATCGGCAATAGCTTCCTTGCTCTTCTTCTATATGTTGAAAACGCAATGGGGCAAAAAGCACTGCGGGCATAAAAATAAGGTTGCAACGTGGAGGCTCACTTCATTCCAGAAGCTTGATCTCACGGAAATAAACTTCCTCTCGAGTTTGACAGACAATAACCTCATAGGGAGTGGAGGGTTTGGGAAAGTTTACCGGATTGCTTCAAATCGTCCAGGTGAGTATGTTGCGGTGAAGCGGATCTGGAATCGCGAGGATGTGGATGACAAGTTAGAGAAAGAGTTCCAGGCTGAGGTTGAGATCCTGGGCAACATTCGGCACTCGAATATAGTGAAGCTTTTGTGCTGCTATGCAAGTGAGAACTCCAAACTTCTTGTTTATGAATACATGGAAAATCAGAGCCTGGATAAATGGCTTCATGCAGAGGAAAAAACATCGCCTCCTGGGTTGAGTTGGCCAACGAGGTTGAATATTGCCATTGGGGCTGCACAAGGCCTGTGTTACATGCACCATGAATGCTCACCCCCCGTCATCCACCGAGATGTCAAATCTAGCAATATACTGTTGGACTCAGAGTTCAGAGCTAAAATAGCAGATTTTGGGCTCGCCAAGATGTTGGCAAAGCCCGGTGAACTAAACACCATGTCTGCACTAGCAGGCTCTTTTGGCTACATTCCACCAGAATATGCTTATTCAACTAAGATTAACGAGAAAGTTGATGTTTATAGCTTTGGTGTTGTGCTCTTAGAGCTTGTTACGGGAAGGAAGCCTAATATAAGCGGCGAGCGTGCATGCAGCTTAGTTGAATGGGCGTGGGAGCATTTTAATGAAGCCAAGAGCCTTACTGATGCATTCGATGAGAATATCAAAGAACCACGTTATGCGCAAGAGATGGCTAATGTCTTCAAATTGGGCCTCCTTTGCACAAGCACCTTGCCGTCAACCAGACCTTCCACGAAAGAGATTTTGCAAGTACTTCGGTGTTGTCATTCAGGTTCTACACGTAGAAAAATGGGAAATGAATTTGATATCGCTCCTCTACTTGGTGACACAAGGTACGTTTGTAGTTACAAGGAGAGTAAGGCTGCAACCAATAACTCATCTTGGTGA 3060 0.4641 MSKVPLFISFHFFLLFSVAVPSRVISETEQTILLTLKRELGDPPSLRSWKPSPSAPCDWTEIGCNSGGAVTKLVLSSKGITTTKSLPSTICNLTHLLELNLFNNFIAGEFPTTLYECSNLRYLNLSQNYLAGAIPADVDRLKTLTFLDLTANSFSGEIPAAIGNLLELQTLYLSANNFEGTVPREIGNLLNLEFLGLGYNLKLAPWEFPLEFRKLRNLRSMYMPQCNLIGEIPEYFGNIFTNLERLDLGKNKISGSIPRNLFSLRKLRFLYLFSNRLSGAIPSDTMQCLELIELDFAKNNLTGSIPPEFGKLKNLSTLHLYENHLVGEIPVSLSQIPNLIYFRVFSNNLSGTLPPELGLHSKLTVFEVSKNQLSGGLPEHLCAGGALIGVVAFSNNFSGVLPEWIGNCPSLATVQLYNNKFSGEVPLGLWTMNNLSSLILSNNSFSGPLPSQVFWNMTRIEIANNNFSGGISVGITSAKNLMFLDARNNMLLGEIPRELTQLSQLTALMLDGNQLSGALPSEIISWQSLNILTLSRNKLSGQITTAITALPRLAYLDLSQNDISGEIPPQFDRLRFVFLNLSSNRLSGKIPDEFNNLAFENSFLNNPHLCAYNPNVHLDNCLTKTASAAPQSSNSSSKSLALVLAATAVVLSAIASLLFFYMLKTQWGKKHCGHKNKVATWRLTSFQKLDLTEINFLSSLTDNNLIGSGGFGKVYRIASNRPGEYVAVKRIWNREDVDDKLEKEFQAEVEILGNIRHSNIVKLLCCYASENSKLLVYEYMENQSLDKWLHAEEKTSPPGLSWPTRLNIAIGAAQGLCYMHHECSPPVIHRDVKSSNILLDSEFRAKIADFGLAKMLAKPGELNTMSALAGSFGYIPPEYAYSTKINEKVDVYSFGVVLLELVTGRKPNISGERACSLVEWAWEHFNEAKSLTDAFDENIKEPRYAQEMANVFKLGLLCTSTLPSTRPSTKEILQVLRCCHSGSTRRKMGNEFDIAPLLGDTRYVCSYKESKAATNNSSW 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01784 1019 SMART serkin_6 700 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian4g01784 1019 SUPERFAMILY Protein kinase-like (PK-like) 694 976 IPR011009 -
Vian4g01784 1019 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 383 625 - -
Vian4g01784 1019 FunFam Receptor-like protein kinase HSL1 isoform A 26 180 - -
Vian4g01784 1019 Gene3D Ribonuclease Inhibitor 25 205 IPR032675 -
Vian4g01784 1019 ProSiteProfiles Protein kinase domain profile. 700 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian4g01784 1019 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 183 281 - -
Vian4g01784 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Vian4g01784 1019 ProSitePatterns Protein kinases ATP-binding region signature. 706 729 IPR017441 GO:0005524
Vian4g01784 1019 FunFam Kinase family with leucine-rich repeat domain-containing protein 780 991 - -
Vian4g01784 1019 Pfam Leucine rich repeat 226 277 IPR001611 GO:0005515
Vian4g01784 1019 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 208 971 - -
Vian4g01784 1019 Gene3D Phosphorylase Kinase; domain 1 680 779 - -
Vian4g01784 1019 CDD STKc_IRAK 706 976 - -
Vian4g01784 1019 SUPERFAMILY L domain-like 386 597 - -
Vian4g01784 1019 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Vian4g01784 1019 Gene3D Ribonuclease Inhibitor 206 349 IPR032675 -
Vian4g01784 1019 Gene3D Ribonuclease Inhibitor 350 624 IPR032675 -
Vian4g01784 1019 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 283 381 - -
Vian4g01784 1019 Gene3D Transferase(Phosphotransferase) domain 1 780 995 - -
Vian4g01784 1019 SUPERFAMILY RNI-like 73 440 - -
Vian4g01784 1019 Pfam Protein kinase domain 702 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian4g01784 1019 SMART LRR_typ_2 432 456 IPR003591 -
Vian4g01784 1019 SMART LRR_typ_2 502 526 IPR003591 -
Vian4g01784 1019 SMART LRR_typ_2 312 336 IPR003591 -
Vian4g01784 1019 SMART LRR_typ_2 165 189 IPR003591 -
Vian4g01784 1019 SMART LRR_typ_2 93 117 IPR003591 -
Vian4g01784 1019 SMART LRR_typ_2 240 264 IPR003591 -
Vian4g01784 1019 SMART LRR_typ_2 550 573 IPR003591 -
Vian4g01784 1019 FunFam Receptor-like protein kinase HSL1 680 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01784 Vian-Chr4 34104823 34107970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01784 18 998 Receptor kinase-like Gene Family AT5G25930 51.822 0.0 959
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vian4g01784 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01784 - K00924 gmx:100782466 1550.8