Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01760 ATGTCAATGTTCGCGAGCATGCCCGAGGAGAATGTTCAGAAATCGTTCGAGGCGTTCTACGAGGAGTGGCTTGCGCGGCACGAAAGTTTCCTTCAGCAGCTTCTGAGCGTCACGCCCAATGATAACGACGCAGAACAGAGGATGCTGATCGAGCAAGTTATGTGTCATTACCAGCAATTTTTGGAAGAGAAATCGAACGTGGCCAACGGCGACGTTTTCCTTATCTTTTCCCCGCCCTGGCTTTCCGCCTACGAGAGGTCGCTGCTCTGGATTGGGGACTACAAGCCCTCGCTCATTCTCCGTCTCGCCAACGGCCATGTCACGGGCTTAACGGCGGAGCAGAGGGAGAAAATGGAGCGAGTCAGGGACGAGACCAAGCGAGCTGAGAGAGAGGTTTCCGAGGCTATGGCTTCCGTTCAAGAGAGCATGGCAAGTCCGCGCATGCTGGTGCTCGTCAGAGTGGTTGACGGCGAGAAAACGGAGCAGCAAGCGGCGGTTCAGGAACTCAAGGAAGCGCTTAAGAAGGTTTTCGAGAAAGGCGACGCGCTTCGCGCGTCGACGATGAGGAAGGTGGTGGAGATCTTAATCCCGCCGCAGACAGTGCAGTTACTGGCGGCGACGATGCGCTTTCAGATGCGCGTGAGGAAGAACGGTTTGCACCTAGACGAGGTTGAACCGTCACGTTGA 687 0.5575 MSMFASMPEENVQKSFEAFYEEWLARHESFLQQLLSVTPNDNDAEQRMLIEQVMCHYQQFLEEKSNVANGDVFLIFSPPWLSAYERSLLWIGDYKPSLILRLANGHVTGLTAEQREKMERVRDETKRAEREVSEAMASVQESMASPRMLVLVRVVDGEKTEQQAAVQELKEALKKVFEKGDALRASTMRKVVEILIPPQTVQLLAATMRFQMRVRKNGLHLDEVEPSR 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01760 228 Pfam Seed dormancy control 36 102 IPR025422 GO:0006351|GO:0043565
Vian4g01760 228 ProSiteProfiles DOG1 domain profile. 13 224 IPR025422 GO:0006351|GO:0043565
Vian4g01760 228 Coils Coil 159 179 - -
Vian4g01760 228 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 15 223 - -
Vian4g01760 228 Coils Coil 111 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01760 Vian-Chr4 33817466 33818152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01760 15 215 Calmodulin-binding Proteins AT1G77920 28.218 1.64e-21 89.7