Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01759 ATGGCGAATCAAGAAACTCAGCAGCGCCGTCCCCGTCAACAACGCCGGTCCAAGGATCGACCGGTGGTCCCGGCTAGGGTTCCGTTGAGGCTGTTGCTGCGGGTAGCGTCGGTTGCCGGAGGCATTCAGTTTGGGTGGGCATTGCAGCTCTCGCTTCTGACGCCGTACGTGCAGCAGCTGGGGATCCCGCACGTGTGGGCCAGCATCATATGGTTGTGTGGGCCGCTCTCTGGGCTGCTGGTGCAGCCCCTGGTGGGCCACTTGAGCGACCGCTGCACCAGCCGGTTCGGCCGCCGGAGACCGTTTATCTTGGGCGGAGCGTTGGCGATCATCATTGCTGTTCTGATCATCGGTCACTCCGCGGACATCGGGTGGTGGTTCGGCGACACGCCCAAACATCGCCCCTGGGCTGTGGGCGTTTTCGTTTTCGGGTTTTGGATTTTGGACGTGGCTAACAACGTCACTCAGGGCCCTTGTAGAGCCTTGCTTGGTGATCTCACTGGCAAGGATCACCGAAGGACACGTGTTGCAAATGCTTATTTCTCCCTGTTTATGGCTATTGGTAATATTCTTGGATATGCAGCTGGATCATACAGTGGTTGGTACAAGGTCTTTGCTTTCACCATGACCCCTGCATGCAATATTAGTTGTGCAAATCTCAAGTCTGCTTTCTATCTTGATATTGGTTTCATCGCTGTCACCACTTATATAAGCATCATGGCAGCTCATGAAGTACCTCTGAGTTCTAGTGGGGCACAACCTGTTGAAGCAGCAGCAGGGGAATCGGGTGCTGCTGGAGAAGCTTTTCTGTGGGAGCTATTCGGGACAGTCAGATATTTTTCAACCCCAGTATGGACAATACTGTCCGCTACTGCCTTAACTTGGATTGGGTGGTTTCCATTTCTCCTTTTTGATACTGATTGGATGGGCCGAGAGATTTATGGTGGTGAACCAAATGAAGGCCCTAATTATGATACTGGAGTTAGAATGGGGGCAATGGGCTTATTGCTTAATTCAGTTGTTCTTGGAATAACGTCTGTACTCATGGAGAGGTTATGCAGGAAGCGGGGGGCTGGGTTTGTGTGGGGAATCTCAAATATCTTGATGGCTGTCTGCTTTATTGCAATGCTTATTGTAACCTATCTGGCAAATAGAATTGGCTATATAGGCAAAGAACTACCACCAACTGGCATTGTGATTGCTGCATTGACAATCTTTACCGTTCTTGGGTTTCCACTTGCAATCACTTACAGCGTTCCATATGCCTTAATTTCCACACATATTCAGTCATTGGGGCTTGGCCAAGGATTGTCAATGGGGGTCCTAAATCTTGCAATAGTGTTCCCACAGATGGTGGTGTCCCTGGGAAGTGGACCGTGGGATCAGCTATTTGGTGGAGGAAACTCTCCGGCCTTTGCCGTGGCAGCTGTTGCAGCCCTTCTCAGTGGATTAATAAGTATCTTGGCTATTCCCCGACCTGGCGGTCGAAAGTCTACAAGTCAAGTATGA 1509 0.5089 MANQETQQRRPRQQRRSKDRPVVPARVPLRLLLRVASVAGGIQFGWALQLSLLTPYVQQLGIPHVWASIIWLCGPLSGLLVQPLVGHLSDRCTSRFGRRRPFILGGALAIIIAVLIIGHSADIGWWFGDTPKHRPWAVGVFVFGFWILDVANNVTQGPCRALLGDLTGKDHRRTRVANAYFSLFMAIGNILGYAAGSYSGWYKVFAFTMTPACNISCANLKSAFYLDIGFIAVTTYISIMAAHEVPLSSSGAQPVEAAAGESGAAGEAFLWELFGTVRYFSTPVWTILSATALTWIGWFPFLLFDTDWMGREIYGGEPNEGPNYDTGVRMGAMGLLLNSVVLGITSVLMERLCRKRGAGFVWGISNILMAVCFIAMLIVTYLANRIGYIGKELPPTGIVIAALTIFTVLGFPLAITYSVPYALISTHIQSLGLGQGLSMGVLNLAIVFPQMVVSLGSGPWDQLFGGGNSPAFAVAAVAALLSGLISILAIPRPGGRKSTSQV 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01759 502 MobiDBLite consensus disorder prediction 1 21 - -
Vian4g01759 502 FunFam Sucrose transport protein 26 490 - -
Vian4g01759 502 NCBIfam sucrose/proton symporter 27 493 IPR005989 GO:0005886|GO:0008515|GO:0015770
Vian4g01759 502 PANTHER SUGAR TRANSPORTER 28 488 - -
Vian4g01759 502 SUPERFAMILY MFS general substrate transporter 30 496 IPR036259 -
Vian4g01759 502 Gene3D MFS general substrate transporter like domains 29 488 IPR036259 -
Vian4g01759 502 Pfam MFS/sugar transport protein 47 194 - -
Vian4g01759 502 CDD MFS_SLC45_SUC 32 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01759 Vian-Chr4 33793509 33814938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01759 1 492 Sucrose Transporter Gene Family AT1G09960 68.911 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01759 K15378 - gmx:100787939 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01759 4 33793509 33814938 Vian4g01759 4 33793509 33814938 ECH