Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01734 ATGAAAGGAGAATACGTAGACCAACAACAACATCCTAAGACCGAAACACCACCTCCTATGTTCTCCAAGCTTCAACCTCAACACCATCCTTTCCAACACCACCCCTTCCAACTCTCCGCCGAGGACGACAACCGTGCCCTCGTCGCCACACCCCCTACTGCACAGAAGCCCAACTCCTCCGGCGGCGACGGTGCCACCATCGAGGTGGTACGGCGTCCCAGGGGCCGTCCTCCCGGCTCCAAGAACAAGCCCAAGCCACCCGTCATCATAACCCGAGACCCTGAACCTGCTATGAGCCCCTACATTTTAGAAGTTTCCGGAGGCAACGACGTCGTCGAGGCCATCGCGCAGTTCAGTCGCCGCAAGAATATGGGCATATGTGTCCTCACTGGTTCCGGGACTGTAGCGAGCGTCACGCTCCGTCAACCTTCCACCACACCCGGCGCCACAGTTACTTTTCAGGGCCGTTTCGATATCCTCTCCGTCTCCGCCACCTTCCTTCCGCAGCAATCCGGCGTGTCTCCGGCGGTTCCCAACGGGTTCGCCATCTCGCTCTCTGGACCGCAAGGGCAGATCGTAGGGGGAATGGTCGCCGGCGGGTTGATGGCTGCGGGAACGGTGTTCGTGATCGCGGCTTCTTTCAACAACCCGGCGTATCATAGGCTGCCGCCGGAGGATGAGGGCGCATCCGCCGGCGATGGACATTCGCCACCAATCTCTGGCGGCGGAGAAAGCGGGCATGGGCATGGGCAGGCGGAGTCGTGTGGAATGTCCATGTACAGCTGTCACTTGCCTTCCGATGTGATTTGGGCTCCGACGGCCAGAGCACCACCGCCACCACCACCTTACTGA 852 0.6033 MKGEYVDQQQHPKTETPPPMFSKLQPQHHPFQHHPFQLSAEDDNRALVATPPTAQKPNSSGGDGATIEVVRRPRGRPPGSKNKPKPPVIITRDPEPAMSPYILEVSGGNDVVEAIAQFSRRKNMGICVLTGSGTVASVTLRQPSTTPGATVTFQGRFDILSVSATFLPQQSGVSPAVPNGFAISLSGPQGQIVGGMVAGGLMAAGTVFVIAASFNNPAYHRLPPEDEGASAGDGHSPPISGGGESGHGHGQAESCGMSMYSCHLPSDVIWAPTARAPPPPPPY 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01734 283 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 45 257 IPR014476 GO:0003680
Vian4g01734 283 FunFam AT-hook motif nuclear-localized protein 99 233 - -
Vian4g01734 283 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 216 IPR005175 -
Vian4g01734 283 MobiDBLite consensus disorder prediction 221 252 - -
Vian4g01734 283 ProSiteProfiles PPC domain profile profile. 95 235 IPR005175 -
Vian4g01734 283 Gene3D - 99 233 - -
Vian4g01734 283 MobiDBLite consensus disorder prediction 1 94 - -
Vian4g01734 283 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 229 - -
Vian4g01734 283 CDD DUF296 100 214 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01734 Vian-Chr4 33487536 33488387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01734 1 279 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 58.966 5.46e-102 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01734 - - gmx:100788098 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01734 4 33487536 33488387 Vian4g01734 4 33487536 33488387 ECH