Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01723 ATGGCACCCAGTTTTGACTGTGTTTCGAGTCTCCTTTGCTCAGAGGACAGCACCGTTTTCGACGAGAGTCATTATGGGGGTACGATGATGGGGGTGTGCGAGGACACGTGGAGTTCCCGGAGGCACCGCTTCGATGAACCGGATGAGTTGCCATTGCTGAGTGATGAGTGCTTGGCGATGATGGTGGAAAGAGAGTGCCAACTCTGGCCTGGTTTGCGTTACTTCAATAGGCTTCAGACTGGAATTTTGGACTGTGGTGCCAGAAAGGAGGCCATTGATTGGATTCACAAGGTCCGATCGCATTTCGGTTTTGGTCCTCTCTGTGGATATCTATCTATAAATTACTTGGATCGATTCCTTTCTGCATATGAATTACCAAAGGGAAGAGTTTGGACAATGCAATTGTTGGCTGTGGCGTGTTTAACTCTTGCAGCCAAAGTGGATGAGACAGAAGTCCCAGTGTCTCTTGATTTACAGGTGGGTGAATCAAAGTTTGTATTTGAGGCTAAGACCATCCAGAGAATGGAGCTTCTAGTACTAAGCACATTGAAGTGGAGAATGCAAGCAATCACTCCTTTCACCTTCCTTGATTACTTCCTTTGCAAGATCAATGGTGATCAGAGTCCATTGAAGTCTGCAATCATGCGATCTATCCAACTAATATCAAGCACTGCAATAGGAATTGACTTCTTGGAATTCAAACCATCAGAGATTGCTGCAGCAGTGGCCATGAATGTCATGGGGGAAACCCAAACAGTTGATACAGGGAAAGCAATTTCTGTGCTGATTCAACACGTAGAAAAGGAGAGACTATTGAAGTGCATTAAAATGATGCAAGAGTTGTCATCAAACAGTGGGTGTGCGAAGGATTCAAGTGGTTCTGTGACTTGCCTACCACAAAGCCCAATAGGTGTGCTAGATGCTTTGTGCTTCAGCCACAAAAGTGATGACACAAATGCTGCTTCATGTGCTAACTCTTCACATAGTACTCCTGATGCTAAAAGGAGGAAGTTAAACAAAACCTGTGGAGCAGAGCTATTGTAG 1044 0.4511 MAPSFDCVSSLLCSEDSTVFDESHYGGTMMGVCEDTWSSRRHRFDEPDELPLLSDECLAMMVERECQLWPGLRYFNRLQTGILDCGARKEAIDWIHKVRSHFGFGPLCGYLSINYLDRFLSAYELPKGRVWTMQLLAVACLTLAAKVDETEVPVSLDLQVGESKFVFEAKTIQRMELLVLSTLKWRMQAITPFTFLDYFLCKINGDQSPLKSAIMRSIQLISSTAIGIDFLEFKPSEIAAAVAMNVMGETQTVDTGKAISVLIQHVEKERLLKCIKMMQELSSNSGCAKDSSGSVTCLPQSPIGVLDALCFSHKSDDTNAASCANSSHSTPDAKRRKLNKTCGAELL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01723 347 SMART Cyclin_C_2 190 300 IPR004367 -
Vian4g01723 347 FunFam D2/4-type cyclin 71 183 - -
Vian4g01723 347 Gene3D - 59 277 - -
Vian4g01723 347 SUPERFAMILY Cyclin-like 45 187 IPR036915 -
Vian4g01723 347 Pfam Cyclin, N-terminal domain 57 187 IPR006671 -
Vian4g01723 347 SUPERFAMILY Cyclin-like 172 281 IPR036915 -
Vian4g01723 347 Gene3D - 71 188 - -
Vian4g01723 347 Pfam Cyclin, C-terminal domain 190 286 IPR004367 -
Vian4g01723 347 CDD CYCLIN_AtCycD-like_rpt2 190 278 - -
Vian4g01723 347 CDD CYCLIN_AtCycD-like_rpt1 87 185 - -
Vian4g01723 347 FunFam D6-type cyclin 184 276 - -
Vian4g01723 347 PANTHER CYCLINS 55 283 IPR039361 -
Vian4g01723 347 SMART cyclin_7 93 181 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01723 Vian-Chr4 33346147 33348122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01723 61 323 Core Cell Cycle Gene Families AT2G22490 48.339 5.47e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01723 K18810 - gmx:547739 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01723 4 33346147 33348122 Vian4g01723 4 33346147 33348122 ECH