Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01712 ATGAACACAAACAGAGCCGAAGCCGAACGCTTGCTCGCCATCGGTGAGAAGCTGCTCGAGAGCCGTGACCTGAACGGCTCCCGCGACTTCGCCATTCTCGCGCAGGAAGCCGAGCCGCTCCTCGAAGGCTCCGACCAGATCCTCGCCATCGTCGACGTCCTCGTCGCCGCCGAGAAGCCGATCCACAACAGCCAACTCGATTGGTACGCCATTCTCCAAGTGGATCGCACGTGCCAGAACCTCGATCTCATCAGAAAACAGTACCGCAGACTCGGTCTTCTCCTTCACCCTGACAAGAACCCTTTCTCCCTCGCCGATCACGCTTTCAAGCTTGTCACCGATGCATGGGCCGTTTTATCCGACCCGGTTCAGAAAGCCTTGTACGACGGAGAGGTCGCCGGTTTGGTCGAAACGGCGAGTTTCTGGACCGCATGTCCGTACTGTTACTTTCTCTTCGAGTACCCTGCGGATTGCGAGGGGTGTTGCCTGAGGTGCCAGAATTGCGAGAGGTCGTTCCACGGGCTTTCGATTCCGTCGCTCCCTCCGCTCGTGCCGGGCCAGGAGGCCTATTATTGTAACTGGGGGTGCTTGCCCATGGGCTTTGTGTTTGGAACTTTGGGCTCCAATGGGCCTGGGTCTGTGCCTGAGAATGACCCGAATGCTGTTTCGAATGGGGCTGCTTCGGAGTTGGGTTCTCTTTCTGCGCGGAAGCAGGGAAGGCCTCAAAAGGGGGACAAGTTTGTTGAAATTTATGAAAATCCCAAGGCACTAACTGGAAGTACACAAGAGGCCAAGCCAGATTATCCTTACAAATTGGCATTCTTTTCTCTTGTGAATTATAGCTCCCCTTGTACTTCAATTTTGGAAGGAAGATTTTCTGGTTATTTTCCGTTTCGAATCTGCATTCATTGGGTGTATCTATACTGCAACCTTGGCGAATGCGCCATGATAGATGAGTGTAGAGGCTAA 969 0.5366 MNTNRAEAERLLAIGEKLLESRDLNGSRDFAILAQEAEPLLEGSDQILAIVDVLVAAEKPIHNSQLDWYAILQVDRTCQNLDLIRKQYRRLGLLLHPDKNPFSLADHAFKLVTDAWAVLSDPVQKALYDGEVAGLVETASFWTACPYCYFLFEYPADCEGCCLRCQNCERSFHGLSIPSLPPLVPGQEAYYCNWGCLPMGFVFGTLGSNGPGSVPENDPNAVSNGAASELGSLSARKQGRPQKGDKFVEIYENPKALTGSTQEAKPDYPYKLAFFSLVNYSSPCTSILEGRFSGYFPFRICIHWVYLYCNLGECAMIDECRG 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01712 322 Gene3D DnaJ domain 55 141 IPR036869 -
Vian4g01712 322 PRINTS DnaJ domain signature 88 103 IPR001623 -
Vian4g01712 322 PRINTS DnaJ domain signature 104 124 IPR001623 -
Vian4g01712 322 PRINTS DnaJ domain signature 69 87 IPR001623 -
Vian4g01712 322 SMART dnaj_3 66 124 IPR001623 -
Vian4g01712 322 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Vian4g01712 322 SUPERFAMILY Chaperone J-domain 61 130 IPR036869 -
Vian4g01712 322 CDD DnaJ 67 121 IPR001623 -
Vian4g01712 322 Pfam DnaJ domain 67 129 IPR001623 -
Vian4g01712 322 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Vian4g01712 322 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01712 Vian-Chr4 33197924 33199445 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01712 2 207 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 56.769 1.27e-84 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01712 - - gmx:100802055 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01712 4 33197924 33199445 Vian4g01712 4 33197924 33199445 ECH