Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01694 ATGGCGTCACTCAATCCGCAGCCTCTGCAGTTCCAGCACCCTGCGATACCCGTCGGCGACGACGGTGACAGTGACGCCGCTGATGATGATGCTATGGATGAGTTGGAGGATGCGCATGTTACTTCAGTGAACGTCGTTGCTAATGCTGCCAGTGCCTACCAAGAACCGCTGCCTGCTATGCCTTCCAGAACTAGCGAGCTCACTCTTTCTTTCGAGGGTGAGGTTCAAGCCGTCTTGCTGCTTTTGGGAGGACGTGATGTGCACGCAGGTGTGCCTGCTGTTGAACTACCATTTGATCAAAGTAACAGGGGTATGGGTGATACTCCGAAGCTTTCGAACCTTTCACGAAGAATAGCATCCTTGGTCAGATTCCGCGAGAAACGAAAGGAAAGATGTTTTGACAAGAAAATTAGGTATACTGTGAGAAAAGAGGTGGCACAGAGGATGCATAGGAAGAATGGGCAGTTTGCATCCTTGAAAGAAAGCCCAGGTTCATCTAACTGGGATTCTGCCCGGAACGCAGATGTCACCATTGTGGTGTCACTGAAAATAATACTCCTGCAATGCGTCGGGGGCCAGCTGGACCAAGGACTTTATGTAATGCATGCGGCCTTATGTGGGCAAACAAGGTTAAGTTTGGTTGTGATCAAATGCTTGGGCACACTCAGAGATCTCAGCAAGGGAGGAAGAAATCTTTCTGTTGTTGAGCAAAGTGATCTGGATATTCCTATTGATGTCAAGCCTACTTCTGTTATTGAAAGAGAATTGTCCGGCATCCATGATGAGCAAGGTAGTTCTGAAGATCCGTCCAAGTCCAACACAGGTGATGGCTCTAGTGGTCATGCAGTAAACCCTAGTGATGAGGAATTGCCTGAAACTGCAGACCACTTTACGAATGCTCCGCCATTAGTAGGACTTGTTCATTCTTCAAGGAATGACACTGAACAGGAACCTCTGGTTGAACTTTCTAATCCTTCAGATACAGACATTGACATTCCAGGAAACTTTGATTAG 1014 0.4763 MASLNPQPLQFQHPAIPVGDDGDSDAADDDAMDELEDAHVTSVNVVANAASAYQEPLPAMPSRTSELTLSFEGEVQAVLLLLGGRDVHAGVPAVELPFDQSNRGMGDTPKLSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKESPGSSNWDSARNADVTIVVSLKIILLQCVGGQLDQGLYVMHAALCGQTRLSLVVIKCLGTLRDLSKGGRNLSVVEQSDLDIPIDVKPTSVIERELSGIHDEQGSSEDPSKSNTGDGSSGHAVNPSDEELPETADHFTNAPPLVGLVHSSRNDTEQEPLVELSNPSDTDIDIPGNFD 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01694 337 MobiDBLite consensus disorder prediction 1 29 - -
Vian4g01694 337 MobiDBLite consensus disorder prediction 309 323 - -
Vian4g01694 337 MobiDBLite consensus disorder prediction 257 337 - -
Vian4g01694 337 PANTHER GATA TRANSCRIPTION FACTOR 28 21 172 IPR045280 GO:0006355
Vian4g01694 337 ProSiteProfiles CCT domain profile. 117 159 IPR010402 GO:0005515
Vian4g01694 337 Pfam CCT motif 117 158 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01694 Vian-Chr4 32961946 32967061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01694 5 178 Tify Gene Family AT3G21175 41.053 1.08e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vian4g01694 CCT 1.3e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01694 - - vun:114164157 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01694 4 32961946 32967061 Vian4g01694 4 32961946 32967061 ECH