Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01628 ATGGTAAAAGCCTTCGACATGGGAGCCGTTCCGTTCAACTCCGACAACTGGGGACCACCGGAAACAGCGGCCGTCGGCGGTAGCAGCAACCTTCCTCTCAACGTTCCCTTTGCCCCCTTCTCCCGTTCTGAAAAATTGGGTCGCATCGCCGACTGGACCCGCAATTTCAACAACCCGGCCCGCTTCAAGAACCCTGCAGATTCCGTCTTCGACTTCACCAACGATGACTTCTTCCCGGCCTCCGCTGACGACGACGCCTCATTCCACCTCGTCGATGGCAAGCCTCCACCGCGCCCCAAATTCGGCCCTAAGTGGCGTTTCCAGCAGCAGCGTCAGCTTTCGCAAGAGAACGAGACTTTCTGTAATTGA 369 0.5745 MVKAFDMGAVPFNSDNWGPPETAAVGGSSNLPLNVPFAPFSRSEKLGRIADWTRNFNNPARFKNPADSVFDFTNDDFFPASADDDASFHLVDGKPPPRPKFGPKWRFQQQRQLSQENETFCN 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01628 122 MobiDBLite consensus disorder prediction 88 122 - -
Vian4g01628 122 MobiDBLite consensus disorder prediction 107 122 - -
Vian4g01628 122 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 3 117 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vian4g01628 122 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 7 112 IPR007783 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01628 Vian-Chr4 31996251 31996838 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01628 3 115 Eukaryotic Initiation Factors Gene Family AT5G44320 52.308 4.91e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01628 K03251 - gmx:100799613 193.741