Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01618 ATGACTTCAATGGGCCGTCCTTCTGATCAGAACCTTGAAACCAAAGAGATCGATCTGAGAAGTATGTCGTCTTCTTCACATGGTCAGGTACCACAAGTCTACAAAGTGGCAGTTCCTCCAAGACAGAACCTCTTCAAGGAATTCCAAGACATCATTAAAGAAATATTATTTGCTGATGATCCTCTAAGACCCTTCAAAGATCAATCTATATCAAGGAAGTTCATCCTCGGTATTGAGGCCATATTTCCAATACTTAAGTGGGGAAGAAGTTACAACCTTAAAAAATTTAGAGGGGATTTAATATCTGGTCTCACTATTGCGAGTCTTTGCATTCCTCAGGATATTGGATACGCCAAGCTTGCACATTTGTCTCCACAGTATGGACTGTACTCAAGTTTTGTTCCACCATTGATCTATGCTGTCATGGGTAGCTCTCGTGATATTGCTATAGGACCTGTAGCAGTGGTTTCTCTCTTGTTGGGGACCCTACTTAGTAATGAGATTGATCCTATTAAAAATGCGGAAGAATATCAGCGACTTGCTTTTACAGCCACTTTTTTTGCTGGGATTACTCAAGCAACGCTTGGTGTTCTTAGATTAGGATTCTTGATCGACTTCCTATCCCATGCTGCTATTGTCGGTTTTATGGGGGGTGCTGCTATCACAATTTCCCTTCAACAGCTCAAAGGTTTTCTTGGCATTAAAACTAAAATGTTCACAACGAAAACTGATATTGTCTCTGTGCTGCATTCAGTATTCCATACAGCCCATCATGGATGGAACTGGGAAACTATAGTCATTGGAGCTAGCTTTTTGAGTTTTCTTCTGGTCACCAAATACATTGGAAAGAAAAACAGGAGATTATTCTGGCTGCCAGCAATTGCTCCATTGATATCCGTTATTTTGTCCACTTTTTTTGTATTCATAACCCGTGCAGATAAGCAAGGAGTAGAAATTGTGAGAAAAATAGAAAAAGGAATCAATCCATCATCTGTTAAAGATCTTTATTTAACAGGAGAAAACCTTGGAAAAGGTTTTAAAGTTGGCATCGTGGCAGGCATGATAGCATTGACTGAAGCCTCGGCAATTGGAAGAACATTTGCATCTATGAAGGACTATCAACTAGATGGAAACAAAGAAATGGTTGCACTAGGAACAATGAATATTGTTGGTTCGATGACTTCCTGTTATGTGGCGACTGGTTCTTTCTCTCGGTCAGCAGTAAATTTCATGGCTGGCTGCCAAACTGCAGTCTCTAACATTGTGATGTCAGTAGTTGTGTTCTTAACCCTGGAATTCATCACTCCACTTTTTAAGTACACTCCAAATGCCATTCTTTCTGCCATCATCATTTCTGCTGTCATCAACCTTATAGACTATGAGGCAGCAATTTTGATTTGGAAGATAGATAAATTTGACTTTGTCGCTTGCATGGGTGCATTCTTTGGCGTTGTTTTTGTCTCGGTTGAGATAGGACTTCTAATTGCTGTCTGTATATCCTTTGCAAAGATCCTACTACAAGTAACAAGACCCCGAACCGCAATTCTGGGGAAGATTCCTAGGACTAATGTCTATAGAAACATCCAACAATATCCAGAAGCTAGTAAGGTTCCAGGTGTACTGATTGTAAGAGTTGATTCTGCAGTATATTTTTCCAACTCCAATTATGTCAAAGAAAGGACATTAAGATGGCTGACGGATGAAGAAGAAAAAGTGAAAGGAGACTACCCCACAAAAATCCAGTTTTTGATAGTTGAAATGTCACCCGTTACTGATATTGATACAAGTGGCATCCAAGCCTTCGAAGAGTTACATAGAAGTCTTCAAAAGAGAGAAATTGAGCTTCTTCTGGCAAATCCTGGTCCAGTAGTGACAGAGAAGCTTTACGCATCCAATTTTGCAAACGCCATAGGAGAGAAGATCTTCCTCACCGTTGCAGAGGCTGTTGCATATTGTTCTCCAAAGGTGGCCGAGGACCCTTGA 1983 0.4039 MTSMGRPSDQNLETKEIDLRSMSSSSHGQVPQVYKVAVPPRQNLFKEFQDIIKEILFADDPLRPFKDQSISRKFILGIEAIFPILKWGRSYNLKKFRGDLISGLTIASLCIPQDIGYAKLAHLSPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLSNEIDPIKNAEEYQRLAFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITISLQQLKGFLGIKTKMFTTKTDIVSVLHSVFHTAHHGWNWETIVIGASFLSFLLVTKYIGKKNRRLFWLPAIAPLISVILSTFFVFITRADKQGVEIVRKIEKGINPSSVKDLYLTGENLGKGFKVGIVAGMIALTEASAIGRTFASMKDYQLDGNKEMVALGTMNIVGSMTSCYVATGSFSRSAVNFMAGCQTAVSNIVMSVVVFLTLEFITPLFKYTPNAILSAIIISAVINLIDYEAAILIWKIDKFDFVACMGAFFGVVFVSVEIGLLIAVCISFAKILLQVTRPRTAILGKIPRTNVYRNIQQYPEASKVPGVLIVRVDSAVYFSNSNYVKERTLRWLTDEEEKVKGDYPTKIQFLIVEMSPVTDIDTSGIQAFEELHRSLQKREIELLLANPGPVVTEKLYASNFANAIGEKIFLTVAEAVAYCSPKVAEDP 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01618 660 Pfam Sulfate permease family 96 478 IPR011547 GO:0016020
Vian4g01618 660 SUPERFAMILY SpoIIaa-like 532 653 IPR036513 -
Vian4g01618 660 Gene3D STAS domain 510 656 IPR036513 -
Vian4g01618 660 Pfam STAS domain 531 648 IPR002645 -
Vian4g01618 660 CDD STAS_SulP_like_sulfate_transporter 531 643 - -
Vian4g01618 660 FunFam Sulfate transporter 31 510 655 - -
Vian4g01618 660 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Vian4g01618 660 NCBIfam sulfate permease 83 647 IPR001902 GO:0016020|GO:0055085
Vian4g01618 660 ProSiteProfiles STAS domain profile. 530 652 IPR002645 -
Vian4g01618 660 PANTHER SULFATE TRANSPORTER 48 653 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01618 Vian-Chr4 31858154 31862078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01618 1 659 Inorganic Solute Cotransporters AT1G22150 72.121 0.0 952
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01618 K17470 - gmx:100804208 1142.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01618 4 31858154 31862078 Vian4g01618 4 31858154 31862078 ECH