Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01584 ATGGCGGCTTCAGTCGACAACCGTCCGTTCACCGTCCACCAACACCCCGTCGTTCGCTCCTACAAGCCTGCTCCGGAACTCCCGCGTCCTATCAAGTTACCCCTCCCACCACCACCCTCCGATTCTTCAAGCGACGACGAAGAAGAAACCTCTGTGTTGAAGGAACTCATTCTAAAGTCCAGCGTGGAAGTTGAATCCTCCATTTTCGACCCTCGAGACGATGGAACCTCCGACCACTGGGTCAAACGGAACGCTTCCCTGATCCGGTTGACCGGAAAGCACCCCTTAAACTCGGAGCCACCCCTCGCTCGTCTCATGCACCACGGTTTCATCACTCCGGTTCCTCTCCACTACGTCCGTAACCACGGACCCGTGCCACGGGCTCGCTGGGAGGACTGGACCGTTGAGGTCAAGGGCCTCGTTAGTCGGCCCACTTGCTTCACCATGGAGCAGCTGCTCCACGACTTTCCAATCCGCGAGTTCCCTGCGACACTTGTCTGCGCTGGGAACAGGCGCAAGGAACAGAACATGGTGAAACAGAGCATCGGCTTCCACTGGGGGCCCGCCGCCATATCTACTTCGGTGTGGCGCGGTATACCGTTGCGGACCCTGTTGAAGCGGTGCGGGATCTACAGCCGCGCGAAGGGAGCCCTTCACGTGTGCTTCGAAGGCTCCGAGGATCTGCCAGCTGACGGTGGGTCAAAGTACGGGACCAGTATCACGAGGGAGGTTGCACTCGATCCCTCTCGCGACATCATCCTCGCTTACATGCAAAACGGCGAGCTTTTGTCCCCGGATCATGGCTTCCCCGTTAGGGTGATAATACCCGGTTTCGTCGGTGGCCGCATGGTGAAATGGTTGAAGCGCATCGTTGTCTCTACCCAGCAATCTCAAAGCTATTACCATTACATGGATAACAGGGTGCTTCCATCTCACGTGGATGCCGAACTTGCCAATGCAGAAGCTTGGTGGTACAAGCCAGAGTATTGCATCAACGAGGTCAACATAAACTCCGTCATAACAACGCCCTCTCACGAAGAGATCTTGCCTATCAACTCATGGACTACTCAGATGCCTTATTTCATCAGAGGCTACGCCTATTCCGTGAAGCAATTGGAAGTGAATTTGGGTGTGAGAATAAACGTGAAGATGATGGTTGATGCAGGAGGTGGGAGAAAGGTGACACGTGTGGAGGTAACGCTGGACGGTGGTGAAACGTGGCAAGTGTGCAGCGTGGAATGTCCGGAGAAGCCGAACAAATATGGGAAGTACTGGTGTTGGTGTTTCTGGTCCTTGGAGGTGGAGGTGTTGGATCTTCTCGCAGCAAAAGATATTGCGGTGCGAGCTTGGGACGAGGCCCTCAACACCCAGCCAGAGAAACTCATCTGGAATGTTTTGGGAATGATGAACAACTGCTGGTTCAGAGTGAAGACAAACGTGTGCAAGCCGAAGAAGGGTGAGATTGGTATAGTGTTCGAGCACCCCACCCAACCAGGCAACCAATCTGGCGGATGGATGGGAAGAGAGAGGCAGCTGGAGATATCATCGGAGTCCAACCCATCCCTCAAGAAGAGTGTTTCCTCCCCATTCATGAACACAACCACCAAAACCTATTCCATCTCCGAAGTCAGAAGACACAACAACCGAGATTCGGCTTGGATCATAGTCAACGGCCATGTCTACGATTGCACCCGCTTCCTCAAAGACCATCCTGGCGGCGAAGATAGCATCCTCATCAACGCCGGCACCGACTGTACCGAGGAGTTCGAAGCCATTCACTCCGGAAAAGCCAAGGAAATGCTCCAAGACTACCGAATCGGTGAGCTCATGACCACCGACTACACCTCTGACTCCTCTTCCCCCAACTCCTCCGTACATGGCAATTCTGAAACCACCCACTTGGCCCCAATCAGAGAAGTGGCTCTCAACCCACGCGAGAAAATCCCATGCAAGCTCCTCTCCAGAACCTCCATCTCCAACGACGTCAGGCTCCTCCGCTTTGCGTTACCCAGCGAGGACCAGCTGATGGGTTTGCCAGTCGGGAAGCACGTATTCTTATGTGCCACTGTCGACGAGAAGCTATGCATGCGAGCCTACACCCCCACAAGCAGTGTAGATGAAGTGGGTATCTTTGACCTCGTCGTCAAGGTTTACTTCAAAGGAGTGCATCCTAAATTCCCCAACGGTGGTACCATGTCTCAACACTTGGACTCGCTCCCCATTGGCTCTGTCTTGGACGTGAAAGGCCCACTAGGCCACATAGAATACACCGGGAGAGGAAACTTCCTCGTCCAGGGGAAGCCTAGGTTTGCCAAGAGGCTAGCCATGTTGGCTGGTGGCACCGGGATCACACCCATCTACCAAGTGGTTCAAGCCATTCTGAAGGACCCAGAGGACCACACCGAAATGCATGTGGTGTACGCGAATCGAACCGAGGATGATATATTGCTGAGAGAGGAGCTTGATGAATGGGCTAAGAAACATGACAGGCTCAAGGTGTGGTACGTGGTGCAAGAAAGCATAAGAGAAGGGTGGGAATACAGTGTGGGGTTCATGACCGAGACTATCCTCCGAGAGCATGTACCAGCTGCATCTCCTGATACCTTGGCGTTAACTTGTGGTCCACCTCCCATGATTCAGTTTGCGGTGAAACCCAATTTGGAGAAGTTGGGCTACGACATCCAGAACGACTTGCTTGTGTTTTAG 2706 0.537 MAASVDNRPFTVHQHPVVRSYKPAPELPRPIKLPLPPPPSDSSSDDEEETSVLKELILKSSVEVESSIFDPRDDGTSDHWVKRNASLIRLTGKHPLNSEPPLARLMHHGFITPVPLHYVRNHGPVPRARWEDWTVEVKGLVSRPTCFTMEQLLHDFPIREFPATLVCAGNRRKEQNMVKQSIGFHWGPAAISTSVWRGIPLRTLLKRCGIYSRAKGALHVCFEGSEDLPADGGSKYGTSITREVALDPSRDIILAYMQNGELLSPDHGFPVRVIIPGFVGGRMVKWLKRIVVSTQQSQSYYHYMDNRVLPSHVDAELANAEAWWYKPEYCINEVNINSVITTPSHEEILPINSWTTQMPYFIRGYAYSVKQLEVNLGVRINVKMMVDAGGGRKVTRVEVTLDGGETWQVCSVECPEKPNKYGKYWCWCFWSLEVEVLDLLAAKDIAVRAWDEALNTQPEKLIWNVLGMMNNCWFRVKTNVCKPKKGEIGIVFEHPTQPGNQSGGWMGRERQLEISSESNPSLKKSVSSPFMNTTTKTYSISEVRRHNNRDSAWIIVNGHVYDCTRFLKDHPGGEDSILINAGTDCTEEFEAIHSGKAKEMLQDYRIGELMTTDYTSDSSSPNSSVHGNSETTHLAPIREVALNPREKIPCKLLSRTSISNDVRLLRFALPSEDQLMGLPVGKHVFLCATVDEKLCMRAYTPTSSVDEVGIFDLVVKVYFKGVHPKFPNGGTMSQHLDSLPIGSVLDVKGPLGHIEYTGRGNFLVQGKPRFAKRLAMLAGGTGITPIYQVVQAILKDPEDHTEMHVVYANRTEDDILLREELDEWAKKHDRLKVWYVVQESIREGWEYSVGFMTETILREHVPAASPDTLALTCGPPPMIQFAVKPNLEKLGYDIQNDLLVF 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01584 901 SMART Cyt_b5_2 538 610 IPR001199 -
Vian4g01584 901 PRINTS Cytochrome B5 reductase signature 676 687 - -
Vian4g01584 901 PRINTS Cytochrome B5 reductase signature 775 794 - -
Vian4g01584 901 PRINTS Cytochrome B5 reductase signature 869 877 - -
Vian4g01584 901 PRINTS Cytochrome B5 reductase signature 742 756 - -
Vian4g01584 901 PRINTS Cytochrome B5 reductase signature 813 824 - -
Vian4g01584 901 PRINTS Cytochrome B5 reductase signature 697 704 - -
Vian4g01584 901 Gene3D Translation factors 637 751 - -
Vian4g01584 901 PRINTS Cytochrome B5 signature 585 592 IPR001199 -
Vian4g01584 901 PRINTS Cytochrome B5 signature 570 584 IPR001199 -
Vian4g01584 901 PRINTS Cytochrome B5 signature 560 570 IPR001199 -
Vian4g01584 901 PRINTS Cytochrome B5 signature 597 609 IPR001199 -
Vian4g01584 901 PIRSF Nitr_rd_NADH 11 900 IPR012137 GO:0006809|GO:0042128|GO:0050464
Vian4g01584 901 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 645 757 IPR017927 GO:0016491
Vian4g01584 901 Pfam Oxidoreductase NAD-binding domain 776 883 IPR001433 GO:0016491
Vian4g01584 901 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 744 895 IPR039261 -
Vian4g01584 901 PANTHER SULFITE REDUCTASE 70 483 - -
Vian4g01584 901 Gene3D - 752 901 IPR039261 -
Vian4g01584 901 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 535 610 IPR001199 -
Vian4g01584 901 MobiDBLite consensus disorder prediction 27 41 - -
Vian4g01584 901 FunFam Nitrate reductase 370 529 - -
Vian4g01584 901 PRINTS Eukaryotic molybdopterin domain signature 163 174 IPR008335 GO:0016491
Vian4g01584 901 PRINTS Eukaryotic molybdopterin domain signature 174 186 IPR008335 GO:0016491
Vian4g01584 901 PRINTS Eukaryotic molybdopterin domain signature 247 263 IPR008335 GO:0016491
Vian4g01584 901 PRINTS Eukaryotic molybdopterin domain signature 264 277 IPR008335 GO:0016491
Vian4g01584 901 PRINTS Eukaryotic molybdopterin domain signature 88 102 IPR008335 GO:0016491
Vian4g01584 901 PRINTS Eukaryotic molybdopterin domain signature 280 293 IPR008335 GO:0016491
Vian4g01584 901 PRINTS Eukaryotic molybdopterin domain signature 331 343 IPR008335 GO:0016491
Vian4g01584 901 PRINTS Eukaryotic molybdopterin domain signature 362 376 IPR008335 GO:0016491
Vian4g01584 901 PRINTS Eukaryotic molybdopterin domain signature 189 204 IPR008335 GO:0016491
Vian4g01584 901 PRINTS Eukaryotic molybdopterin domain signature 423 433 IPR008335 GO:0016491
Vian4g01584 901 PRINTS Eukaryotic molybdopterin domain signature 110 126 IPR008335 GO:0016491
Vian4g01584 901 PRINTS Eukaryotic molybdopterin domain signature 448 460 IPR008335 GO:0016491
Vian4g01584 901 PRINTS Eukaryotic molybdopterin domain signature 461 474 IPR008335 GO:0016491
Vian4g01584 901 Gene3D - 333 528 - -
Vian4g01584 901 FunFam Sulfite oxidase, mitochondrial 533 614 - -
Vian4g01584 901 CDD cyt_b5_reduct_like 650 893 - -
Vian4g01584 901 Pfam Mo-co oxidoreductase dimerisation domain 382 480 IPR005066 GO:0016491|GO:0030151
Vian4g01584 901 Pfam Mo-co oxidoreductase dimerisation domain 329 368 IPR005066 GO:0016491|GO:0030151
Vian4g01584 901 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 71 331 IPR036374 -
Vian4g01584 901 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 139 174 IPR022407 GO:0043546
Vian4g01584 901 FunFam Nitrate reductase [NADH] 752 901 - -
Vian4g01584 901 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 533 614 IPR036400 -
Vian4g01584 901 MobiDBLite consensus disorder prediction 1 51 - -
Vian4g01584 901 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 566 573 IPR018506 GO:0020037
Vian4g01584 901 FunFam NADH-cytochrome b5 reductase 637 751 - -
Vian4g01584 901 Gene3D - 531 614 IPR036400 -
Vian4g01584 901 Pfam Oxidoreductase FAD-binding domain 650 756 IPR008333 -
Vian4g01584 901 CDD eukary_NR_Moco 73 478 - -
Vian4g01584 901 FunFam Nitrate reductase 74 323 - -
Vian4g01584 901 Pfam Cytochrome b5-like Heme/Steroid binding domain 541 609 IPR001199 -
Vian4g01584 901 SUPERFAMILY E set domains 333 480 IPR014756 -
Vian4g01584 901 Gene3D - 72 323 IPR036374 -
Vian4g01584 901 SUPERFAMILY Riboflavin synthase domain-like 638 757 IPR017938 -
Vian4g01584 901 Pfam Oxidoreductase molybdopterin binding domain 122 301 IPR000572 -
Vian4g01584 901 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 813 824 IPR001709 GO:0016491
Vian4g01584 901 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 801 810 IPR001709 GO:0016491
Vian4g01584 901 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 569 579 IPR001709 GO:0016491
Vian4g01584 901 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 845 861 IPR001709 GO:0016491
Vian4g01584 901 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 697 704 IPR001709 GO:0016491
Vian4g01584 901 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 869 877 IPR001709 GO:0016491
Vian4g01584 901 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 775 794 IPR001709 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01584 Vian-Chr4 31395639 31399410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01584 638 892 NADPH P450 reductases AT5G17770 38.760 1.03e-48 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01584 K10534 - gmx:732634 1531.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01584 4 31395639 31399410 Vian4g01584 4 31395639 31399410 ECH