Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01577 ATGAGCAAACCCAAAACCCAAAGAAAACCAACCATTACCAAACATGTCAGCCAAAACCAAAACCAAGAGCTACAGAAAACAGAAAAACAACCTTCATGGGTGGTAAGAGGCCTGTTGGCTTGTAGGAATGTTCAAATCCAGCAACATCAGCAGCAGCAGCAGAAGGAAGCAAAACCACCTCCAGAAGCAAAAGATCATCAACACAGGAAAAAACAGGAACAGAGAAAGCTGCAAGAGGAAAGAATCCCGGAAGATAACAGCAAGAAGTGCAAGAAGATGAAGTGCTCAGGTTCGCTTTGTAACAACACCAAGATCACGGCAAAGCCGGACACATCAACCCCAGATATCCACAAGAAAAGGTTGTTTCTAAATGGATGCAACAGCAACGATGCTTCCAGCAGATCCATGAAAGCACCTCTTACCGAACACAATGGACCCGTTTCAGCTTCTTCCTCTTCATTGTCAGCATCTTCCAATTCTTCTGGCGCTGGCTCTTTCAGGGGAATGCCATTCAGGAGACTTTCCGGCTGTTATGAGTGTAGAATGGTGGTAGACCCGGTTCTAGGCTTCACTAGAGATCCTTCTCTCAGGAGTAGCATTTGTTCTTGCCCCGACTGTGGCGAGATCATGAAAGCTGAAAGCTTGGAGCATCACCAGGCAGTCAAACATGCAGTTTCTGAACTGGGTCCAGAAGACACCAGCAAGAACATAGTTGAAATAATATTCCACTCCAGCTGGCTGAAGAAGCAATCTCCAGTGTGCAAAATAGACCGCATCCTCAAGGTCCACAACACCCAGAAAACCATTACCAGATTCGAAGAATACAGAGATTCCATAAAAGCAAAGGCCACGAAACTCCCCAAGAAACACCCACGTTGCATAGCAGATGGCAACGAGCTACTCAGGTTTCACTGCACCTCCTTCGCGTGTTCTCTAGGCCTAAACGGGTCCTCCAACTTGTGCAACTCCGTTCCACAGTGCAACATTTGCAGCATAATCAAGCACGGGTTCAAGGTTACCGGAGGGAGCGGTATCTTGACAACGGCAACGAGTGGGAAGGCTCACGACAAGGCGTGTGTGGATGAGAGTGAAGAGAAGAGAGCAATGCTGGTTTGTCGGGTTATAGCAGGAAGGGTGAAGAAGAATGCAGAAGGAGGCATGGAGGAGTATGATTCGGTTGCAGGGGCTGTTGGGGCTTATTCCAATTTGGATGAGTTGGTTGTATTCAACCCAAGAGCCATTTTGCCTTGCTTTGTTGTAATCTATAGTGGCTTTTGA 1278 0.4718 MSKPKTQRKPTITKHVSQNQNQELQKTEKQPSWVVRGLLACRNVQIQQHQQQQQKEAKPPPEAKDHQHRKKQEQRKLQEERIPEDNSKKCKKMKCSGSLCNNTKITAKPDTSTPDIHKKRLFLNGCNSNDASSRSMKAPLTEHNGPVSASSSSLSASSNSSGAGSFRGMPFRRLSGCYECRMVVDPVLGFTRDPSLRSSICSCPDCGEIMKAESLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTITRFEEYRDSIKAKATKLPKKHPRCIADGNELLRFHCTSFACSLGLNGSSNLCNSVPQCNICSIIKHGFKVTGGSGILTTATSGKAHDKACVDESEEKRAMLVCRVIAGRVKKNAEGGMEEYDSVAGAVGAYSNLDELVVFNPRAILPCFVVIYSGF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01577 425 MobiDBLite consensus disorder prediction 1 31 - -
Vian4g01577 425 SUPERFAMILY ADP-ribosylation 225 424 - -
Vian4g01577 425 Gene3D - 224 423 - -
Vian4g01577 425 MobiDBLite consensus disorder prediction 132 165 - -
Vian4g01577 425 MobiDBLite consensus disorder prediction 58 90 - -
Vian4g01577 425 MobiDBLite consensus disorder prediction 45 90 - -
Vian4g01577 425 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 92 422 - -
Vian4g01577 425 MobiDBLite consensus disorder prediction 11 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01577 Vian-Chr4 31244965 31246598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01577 166 422 C2H2 Transcription Factor Family AT1G75710 54.983 9.61e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01577 - - gmx:100817333 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01577 4 31244965 31246598 Vian4g01577 4 31244965 31246598 ECH