Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01567 ATGGAAATAGACATGAACACAGACATCGATGCAATCCACAACCTCCACTTCTCCGGATACACTACCATCACCGACACCACCCCCTCTTCTGACGACGACTACGGTTGCAACTGGAACCACTGGTCCCCCCTCGTCAACTGGGACGCCTTCACCGGATCCCACGATGACTTCCACCACCTCATCGACTCTATCGTCTCCGACGGTCCCGCCGAGTACCCCAGCCCCGAAGACCACGCCGCCAGTAACTCCCCCTCCGCCTCCATAACCGAGGAAGATGACGCCGAGGAAGAAACGGCTGCCGCCGACGATTCCAAGGGCCTAAGACTGGTCCATCTGCTCATGGCCGCCGCGGAGGCCCTCACCGGCGCCACCAAGAGTCGCGACCTGGCTCGAGTGATATTGGTTCGGCTCAGGGATTTGGTGTCCCACGCCTCGCACGGCTCCAACATGGAGAGACTCGCCGCCTACTTCACCGACGCACTCCAGGGCCTGCTAGAAGGCGCCGGGGGTGCGCACAATAACAGCAAACATCACTACTACATCACATGTGGGTCCCACCACCCCCGCGACGATCATCATCATCAAAACGACACCCTCGCGGCCTTCCAACTGCTCCAGGACATATCTCCCTACGTCAAGTTCGGACACTTCACCGCCAACCAGGCCATCCTCGAGGCCGTGGCCCACGAGCGCCGAGTCCACATCGTAGACTACGACATCATGGAGGGGGTCCAGTGGGCTTCTCTTATGCAGGCCCTTGCCTCTGACAAAACAGGTCCACCGGGCCCACACCTTCGAATCACAGCATTGTCCAGAACCGGCACCGGACGCCGCTCCATCGCCAGCGTGCAGGAGACCGGGAGGCGGTTGACGGCGTTTGCCGCATCCCTTGGGCAGCCGTTCACGTTCCACCAGTGCAGGTTGGATCCCGACGAAACGTTTAAACCTTCCTCTCTGAAGCTGGTTCGCGGAGAGGCTTTGGTTTTTAACTGTATGTTAAACTTGCCGCACCTGAGTTACCGCGCGCCCGATTCGATTGCGTCGTTTTTGAGTGGAGCGAAAGAGTTGAAGCCGAGGCTGGTGACTTTGGTGGAGGAAGAGGTGGGGTCCAGTGTGGGAGGGTTCGTGGGAAGGTTCATGGACTCGCTGCATCACTACTCGGCGGTGTTTGACTCGCTGGAGGCTGGGTTTCCGATGCAGGGGCGGGCCAGGGCCCTTGTAGAGCGGATTTTCTTAGGCCCAAGGATAGTTGGCTCGCTGGCCCGGATATATCGGACGGGTGAAGAGCTGGAGGAGAGAAGGTCATGGGGGGAGTGGTTGGGTGCGGCAGGGTTCAGGGGAGTCCCGATGAGCTTCGCCAATCATTGCCAAGCCAAGCTTCTACTGGGTCTTTTCAACGACGGATATCGGGTGGAGGAGTTGGGGACTAATAAGTTGGTGTTGGATTGGAAATCTCGGCGCTTGCTTTCTGCCTCCCTTTGGACTTCTTCTTCCTCAGACTCCCATTAA 1509 0.5865 MEIDMNTDIDAIHNLHFSGYTTITDTTPSSDDDYGCNWNHWSPLVNWDAFTGSHDDFHHLIDSIVSDGPAEYPSPEDHAASNSPSASITEEDDAEEETAAADDSKGLRLVHLLMAAAEALTGATKSRDLARVILVRLRDLVSHASHGSNMERLAAYFTDALQGLLEGAGGAHNNSKHHYYITCGSHHPRDDHHHQNDTLAAFQLLQDISPYVKFGHFTANQAILEAVAHERRVHIVDYDIMEGVQWASLMQALASDKTGPPGPHLRITALSRTGTGRRSIASVQETGRRLTAFAASLGQPFTFHQCRLDPDETFKPSSLKLVRGEALVFNCMLNLPHLSYRAPDSIASFLSGAKELKPRLVTLVEEEVGSSVGGFVGRFMDSLHHYSAVFDSLEAGFPMQGRARALVERIFLGPRIVGSLARIYRTGEELEERRSWGEWLGAAGFRGVPMSFANHCQAKLLLGLFNDGYRVEELGTNKLVLDWKSRRLLSASLWTSSSSDSH 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01567 502 ProSiteProfiles GRAS family profile. 100 495 IPR005202 -
Vian4g01567 502 MobiDBLite consensus disorder prediction 68 93 - -
Vian4g01567 502 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 92 490 IPR005202 -
Vian4g01567 502 Pfam GRAS domain family 109 495 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01567 Vian-Chr4 31062355 31063863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01567 77 500 GRAS Transcription Factor Family AT5G41920 36.406 1.93e-56 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vian4g01567 GRAS 2.4e-100 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01567 - - gmx:100787926 794.267