Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01555 ATGGAACAACACTGTCGTTGTGCTAGTTTTGGAAGCAACTTCAGTAAGGCAAAGCCTTATCTGTTAACGGTCGGACTTCAGTTTGGGTTCGCCGGAGCTCTCATCTTCTCCGTCGCCAGTCTCAACCATGGAATGAATCGTTACGTTTTCGTCGTCTATCGTAATGCCATCGCTGCTTTGGCCCTGGCTCCTTTTGCATTGATTTTTGAGAGACCAGTGATTGACCAGGGCTTCACTTTCTTGGGAATGCAATACACATCAGCTTCGTTTACCTCTGCCATAATGAATGCCGTGCCTTCTGTGACTTTTGTGCTAGCCGTAATTCTAAGGTTAGAGCGTGTAAATGTTAAGGAAATAAGGAGCCTAGCGAAGGTGATTGGGACATTGATCACATTTTCAGGTGCTTTGTTAATGACACTTTACAAAGGTCCTGAATTTAACCTATTTCATTCTGCAAACGCAACCCAAAACCAAGACGGAACTCACTCTCCACAAGTTGTTAAACATTGGCTCTCAGGGACTCTCTTTCTTCTCCTGGGTTGTGTGGCTTGGTCATCTTTCTTCATTTTACAGTCCATAGCACTGAAAAGGTATCCAGCAGAATTGTCTCTCTCTTCTTTGGTGTGCTTATCTGGTGCCGTGCAAGCTAGTGTGGTGGCAATTATTGCCACTCGTCATTCTGGGCTTGCGGCATGGGCCTTGGGCTGGGACTTCAGACTCTACGGCCCTCTCTACACGGGAATTGTTACCTCTGGAATAACGTATTATGCGCAAGGGTTGGTGTTGCAAAGCAGGGGCCCGGTATTTTTAACTGCCTTTAATCCTCTTTGCATGGTCATAACCTGTGCTTTAGGCTCCTTCCTTTTTGCAGAGCAACTTCACTTGGGCAGTATCATCGGAGCTGTCATTATCGCATTGGGTCTGTACTTTGTGGTGTGGGGCAAAGGCAAAGACCATTCAGACCCCACGCCATCATCTCCTACAGCAAAGCAAATGGAGACACAAAAATTGCCAATTTCTTCATCTGATATCTAA 1035 0.4599 MEQHCRCASFGSNFSKAKPYLLTVGLQFGFAGALIFSVASLNHGMNRYVFVVYRNAIAALALAPFALIFERPVIDQGFTFLGMQYTSASFTSAIMNAVPSVTFVLAVILRLERVNVKEIRSLAKVIGTLITFSGALLMTLYKGPEFNLFHSANATQNQDGTHSPQVVKHWLSGTLFLLLGCVAWSSFFILQSIALKRYPAELSLSSLVCLSGAVQASVVAIIATRHSGLAAWALGWDFRLYGPLYTGIVTSGITYYAQGLVLQSRGPVFLTAFNPLCMVITCALGSFLFAEQLHLGSIIGAVIIALGLYFVVWGKGKDHSDPTPSSPTAKQMETQKLPISSSDI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01555 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 317 - -
Vian4g01555 344 MobiDBLite consensus disorder prediction 321 344 - -
Vian4g01555 344 Pfam EamA-like transporter family 172 312 IPR000620 GO:0016020
Vian4g01555 344 PANTHER WAT1-RELATED PROTEIN 18 323 IPR030184 GO:0016020|GO:0022857
Vian4g01555 344 MobiDBLite consensus disorder prediction 320 344 - -
Vian4g01555 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01555 Vian-Chr4 30843687 30847026 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01555 11 341 Nodulin-like Gene Family AT1G44800 44.318 7.66e-105 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01555 - - gmx:100812537 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01555 4 30843687 30847026 Vian4g01555 4 30843687 30847026 ECH
Vian4g01555 4 30843687 30847026 Vian1g00707 1 7211473 7213562 ECH