Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01553 ATGGGTGAGTGGTTGAGAAATGCAAGGCCCTATCTGATGTTATTGGCTGTTCAATTTGGTTCTGCTGGGATGTTCATATTTGCCATGGATGCTATAAAGAAGGGTATGAGCCATTACGTCTTCATTGTCTACCGTAACGCCATAGCCTCTATAACTCTCGCTCCCTTCGCCTTTGTTCTTGAAAGGATAATACTGGATCAGTGTTTCGCTCTATTGGGCATGAAATTCACGTCAGCTTCTTTCCTGTCTGCTGTCATGAACTCCGCACCCTCTGTTACTTTTGTCATGGCTGTTATTCTGAGGTTGGAGCACATGAAGATGAAGGAGGTGGCATGTCAAGCCAAATTGATTGGAACAATAGTAACTTTTGGAGGCACCTTGCTAATGGCTCTTTACAAAGGCCCTGTGATTAGTTTGATGAAATCTTCAACAACCCATGCTGGCCAACCTCAGACTCTCAACAACCCTACCGCTAACCACTGGATCTTAGGAACATGTTTCCTCCTCATCGGTTGTGCAGGCTTCTCTGCGTTTTACATATTACAAACCATAACATTGAGAAAATACCCAACAGAGATGTCCCTGGCTACTTGGGTTTGCTTCGTAGGTGCACTTCAAAGCTCTGTTGTAGCAGCCATCGCAGAACGCCACCACCCTCATGCATGGGCCATTGGTTGGGATACACGACTCTTTGCTCCAGCTTATGCGGGAGTAGTTACATCAGGAGTTCAGTATTACATACAAGGCATGGTGATAAAATCGATGGGCCCAGTTATTGTGACTGCTTTTAATCCCCTTCGTATGATCATCATTACCACCTTGGCCTGCATCATTCTATCTGAGCAACTCTACCTTGGAAGTGTTATTGGAGCAATTGTTGTGGTTCTTGGGCTATATCTAGTTGTGTGGGGAAAAGCTAAAGAATGCCAGCGAAGAATGCCACCATCCCCAGCAAAGGATAACTTTCCAGAAGACCAACGACAGCTACCTATTACTGCTCCTAGGAATGATAGCAATGATAATAAGGGTTAA 1032 0.4486 MGEWLRNARPYLMLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIASITLAPFAFVLERIILDQCFALLGMKFTSASFLSAVMNSAPSVTFVMAVILRLEHMKMKEVACQAKLIGTIVTFGGTLLMALYKGPVISLMKSSTTHAGQPQTLNNPTANHWILGTCFLLIGCAGFSAFYILQTITLRKYPTEMSLATWVCFVGALQSSVVAAIAERHHPHAWAIGWDTRLFAPAYAGVVTSGVQYYIQGMVIKSMGPVIVTAFNPLRMIIITTLACIILSEQLYLGSVIGAIVVVLGLYLVVWGKAKECQRRMPPSPAKDNFPEDQRQLPITAPRNDSNDNKG 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01553 343 PANTHER WAT1-RELATED PROTEIN 10 313 IPR030184 GO:0016020|GO:0022857
Vian4g01553 343 Pfam EamA-like transporter family 163 302 IPR000620 GO:0016020
Vian4g01553 343 MobiDBLite consensus disorder prediction 311 343 - -
Vian4g01553 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 210 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01553 Vian-Chr4 30788689 30792138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01553 3 342 Nodulin-like Gene Family AT2G37460 39.058 1.03e-93 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01553 - - gmx:102665912 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01553 4 30788689 30792138 Vian4g01553 4 30788689 30792138 ECH
Vian4g01553 4 30788689 30792138 Vian2g01406 2 28966322 28973661 ECH