Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01486 ATGCAATTGTATCATCATCCATTTGATTTGGACAGCCAGAAGGTGAGACTTGCGTTGGAAGAGAAAAGCATTGATTACACATCACACCATGTCAATCCTGTAACTGGCAAGAACTTGGATTCTTCATTCTTCAAGATGAATCCTGGTGGAAGACTCCCAGTTTTCCAAAATGGCTCTCACATTCTTTACAAGACTATTGATATAATCCAGTACATAGAAAGAATTGCCGTGTTCTCCTCTGGGTCTGAAAATATCAGTAGCAGTAACAAGGAAGTGATTGAATGGATGCAGAAGGTACAAGAGTGGAATCCAAAGTATTTTTCCCTTTCCCATGTACCAGAGAAATACAGAATATATGTTTCTAAGTTCTTAAGAAGAGTGGTGATTGCTCGAATGTCTGAGTCACCAGAACTAGCAGGTGCTTACCATAAGAAGTTAAAAGAAGCATATCAGACTGAAGAGAGAGTGAAAGATTCAGATGTGTTTATAAGGAGCAAGGAGCATTTGATTAGGCTGCTTGATGAAGCAGAGAAGCAGCTGAGTGAAACACCTTATTTAGCAGGTCAAGAGTTTACTATGGCTGATGTGATGCTCGTTCCAGTATTGTCTCGTTTAGTGCTCTTGGATTTAGAGAAAGAGTACATAACTGGGAGGCCAAACATTGCTGAGTATTGGGTTTTGGTTCAGCAGAGGCCTAGTTATAAGAAAGTGATTGGTAGGTATTTTGATGGTTGGAAAAAGCATAAGACATTGTTAAAAACTTGGTGCTTTGTTCGCGTTAGAAGTTTGCTGAAGAGATATTGA 804 0.3943 MQLYHHPFDLDSQKVRLALEEKSIDYTSHHVNPVTGKNLDSSFFKMNPGGRLPVFQNGSHILYKTIDIIQYIERIAVFSSGSENISSSNKEVIEWMQKVQEWNPKYFSLSHVPEKYRIYVSKFLRRVVIARMSESPELAGAYHKKLKEAYQTEERVKDSDVFIRSKEHLIRLLDEAEKQLSETPYLAGQEFTMADVMLVPVLSRLVLLDLEKEYITGRPNIAEYWVLVQQRPSYKKVIGRYFDGWKKHKTLLKTWCFVRVRSLLKRY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01486 267 Gene3D - 119 238 - -
Vian4g01486 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Vian4g01486 267 CDD GST_N_family 1 73 - -
Vian4g01486 267 SUPERFAMILY GST C-terminal domain-like 153 239 IPR036282 -
Vian4g01486 267 Pfam Glutathione S-transferase, C-terminal domain 166 224 - -
Vian4g01486 267 Gene3D Glutaredoxin 1 75 - -
Vian4g01486 267 CDD GST_C_family 148 225 - -
Vian4g01486 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Vian4g01486 267 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Vian4g01486 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 113 252 IPR010987 -
Vian4g01486 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01486 Vian-Chr4 29817251 29818996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01486 1 267 Glutathione S-transferase Gene Family AT1G77290 67.041 7.87e-141 395
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01486 4 29817251 29818996 Vian4g01486 4 29817251 29818996 ECH
Vian7g00276 7 8134663 8135839 Vian4g01486 4 29817251 29818996 PCT