Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01481 ATGCTTCCGCGGCGGTGCACGGCGTCAGCGGCGGCGGGGCAGACGGGGAACAGCGACAGCGACTTGGATGAGTTTATTATGCGGTGCCTCTCCTGCGAGGAGCAATACGACATGATGGACTCCGGAACCTGCAGGGAGTGCTACCAAGAGGCCAACGAGGCCGAGGAGGAGCTCCGCCTCGAGATCGATGACCTCAAGTCCAAGGTCTCCTTCCTCACACTCTCCTCTCCCACTCTCAATCCTTCTACCGCTGATATCGTCCTCGTTCCCGTCGACGACTCCGACGCCACTCCCATTCCCGCTCACAAGCATGTTCTGGTTAGTCGCTCTCCTGTTTTCAATGCAATGCTTGAGAATGATATGGAGGAAAGGCGGAGTGGCACCATCAAGATTTCTGACGTATCACATGATACCCTCCGCGCTTTTGTTAACTACTTATACACTGCCGAAGCGGCCCTTGATAACCAAATGGCCTGTAACCTGTTGGTTTTGGGAGAAAAGTATCAAGTGAAGCATCTGAAGACATATTGTGAGAAGTATTTGATCGCCAAAATGAATTGGAATAGGGCTATTGCAAACTATGCCTTTGCATATCAATACAATTGCAAACAATTACGAAGTGCGTCCTTGGCAGTGATCTTGGACAAAATGGATTTGCTCACTCAAAACGAATATTATGCGGAGCTCGTGGACACCAATCCTCGTCTTGTTGTGGAAATATATGAAACATATATTGGCAAGCAGTTAAACACCGCAGGCACCTTTTAG 768 0.4961 MLPRRCTASAAAGQTGNSDSDLDEFIMRCLSCEEQYDMMDSGTCRECYQEANEAEEELRLEIDDLKSKVSFLTLSSPTLNPSTADIVLVPVDDSDATPIPAHKHVLVSRSPVFNAMLENDMEERRSGTIKISDVSHDTLRAFVNYLYTAEAALDNQMACNLLVLGEKYQVKHLKTYCEKYLIAKMNWNRAIANYAFAYQYNCKQLRSASLAVILDKMDLLTQNEYYAELVDTNPRLVVEIYETYIGKQLNTAGTF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01481 255 Pfam BTB/POZ domain 81 183 IPR000210 GO:0005515
Vian4g01481 255 Gene3D - 187 254 - -
Vian4g01481 255 ProSiteProfiles BTB domain profile. 84 155 IPR000210 GO:0005515
Vian4g01481 255 SMART BTB_4 84 185 IPR000210 GO:0005515
Vian4g01481 255 Gene3D Potassium Channel Kv1.1; Chain A 51 186 IPR011333 -
Vian4g01481 255 SUPERFAMILY POZ domain 78 182 IPR011333 -
Vian4g01481 255 CDD BTB_POZ_ZBTB_KLHL-like 84 168 - -
Vian4g01481 255 PANTHER SPECKLE-TYPE POZ PROTEIN 70 250 - -
Vian4g01481 255 Coils Coil 48 68 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vian4g01481 BTB 3.7e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01481 K10523 - gmx:100794118 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01481 4 29745858 29748199 Vian4g01481 4 29745858 29748199 ECH