Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01453 ATGTCTCAGGGAAGAGACAGTGCAAAATCTTTGGTTTTGGTCTCTGTGATTTGTCTACTGTGCCTGTTGGTTCTTTCGAAAGGTGCTAATGCAGCAACTTACACTGTTGGAGGACCTGCAGGATGGAGCTTCAACACTGATACTTGGCCCAATGGAAAAAGGTTCAGAGCCGGTGATATCTTAGTCTTCAAGTATGACTCAACGAGCCACAATGTGGTTGCTGTGGATAAGAGTGGATACAGCAACTGCAGAAGTACAGCAGGTGCAAGAGTGTTCCGTTCAGGGAACGATCAAATCAAGCTGGCAAGAGGTCAGAACTACTTCATATGCAACTATCCTGGTCACTGTGAATCTGGGATGAAGATTTCCATTAATGCAGTTTGA 384 0.4505 MSQGRDSAKSLVLVSVICLLCLLVLSKGANAATYTVGGPAGWSFNTDTWPNGKRFRAGDILVFKYDSTSHNVVAVDKSGYSNCRSTAGARVFRSGNDQIKLARGQNYFICNYPGHCESGMKISINAV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01453 127 FunFam basic blue protein-like 32 126 - -
Vian4g01453 127 PANTHER BLUE COPPER PROTEIN 31 125 IPR039391 GO:0009055
Vian4g01453 127 ProSitePatterns Type-1 copper (blue) proteins signature. 104 120 IPR028871 -
Vian4g01453 127 ProSiteProfiles Phytocyanin domain profile. 32 127 IPR003245 GO:0009055
Vian4g01453 127 CDD Plantacyanin 32 126 IPR041844 -
Vian4g01453 127 Gene3D - 32 127 IPR008972 -
Vian4g01453 127 Pfam Plastocyanin-like domain 43 120 IPR003245 GO:0009055
Vian4g01453 127 SUPERFAMILY Cupredoxins 32 126 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01453 Vian-Chr4 29205384 29205933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01453 12 127 Phytocyanin Superfamily AT1G17800 41.176 4.55e-29 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01453 - - gmx:100788635 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01453 4 29205384 29205933 Vian4g01453 4 29205384 29205933 ECH