Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01449 ATGGTGCCTCCGGGGCCACCCACTCCCATTGGTGGTGCCCAGTCTGTTTCTCCCTCTCTTTTAAGATCAAATTCTGGAATGCTAGGAGCTCAAGGGGGTCCCATGCCGTCGCAGACATCTTTCCCTTCACTTGTGTCTCCGCGTACTCAGTTCAACAACATGAACATTCTAGGAAATATGTCCAATGTAACTTCCATACTGAATCAATCTTTCCCAAATGGAGCTCCAAATCCTGGGCTATCTGGTCCAGGAAGTAGCCAACGTGGAGCAATTGATACTGGAGCTGAAACAGATCCGCTCTCCACTGTTGGTAATGGAATGAGCTTCAATAATTCTTCTTCCACGTTTGTACAGTCAAATATAGTAAATGCTGCTTCCTCTGGTCAAGGTCAGGGTCAACAATTTTCAAACCCTTCTAGTAACCAGATGTTGCCTGATCAACAACATTCCCAACAGCTTGAACCTCAAAATTTCCAACACAGTCAGCAGTCAATGCAACAGTTCTCTGGTCCTCTAAATACACAGCAGCTGCCTCCGCAGCAGCATTTTCAATCAATTCGAGGAGGTATAGGTGGCATGGGACCCGTAAAGCTAGAGCCCCAGGTAAACAACGATCAACTTGGACAGCAGCAGCAGCCGTTGCAATCTTTAAGGAGCCTTTCTTCAGTTAAATTGGAGCCACAACAAATGCAGACAATGAGAACATTGGGACCTGTTAAAATGGAGCCTCAACACTCTGATCAACCATTATTTTTGCAGCAGCAACAGCAGCAACAACAACAACAACAATTCCTCCACATGTCAAGTCAATCATCCCAGGCTACTGCTGCCCAGATCAATCTTTTGCGCCAGCACAGGCTTTTACAGTTACAACAACAACACCAGCAGCAGCAACTCTTGAAGGCAATGCCTCAGCAACGCTCCCAGCTACCACAGCAATTTCAACAGCAGAACATGCTAATGAGATCTGTGAAACCAGCTTATGAACCCGGGATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAACAATATTGAGTTCTGGAGAAAGTTTGTTGCTGAGTATTTTGCTCCTAATGCCAAGAAGAAATGGTGTGTTTCTATGTATGGAAGTGGAAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAGCCTGGACGTGGTTTTGAAGCAACTGTTGAGGTTCTTCCCCGGCTTTTCAAGATAAAGTATGAAAGTGGAACTTTGGAAGAACTACTTTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGTCAGATTGTACTAGATTATGCTAAAGCAATACAAGAAAGCGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATTTGTTCTTGGGAATTTTGTGCTCGGCGCCATGAGGAGCTCATACCCAGGAGATTGTTAATACCACAGGTTAGCCAGCTTGGAGCAGTTGCACAAAAATACCAGGCTTTTACTCAAAATGCAACACCAAATATATCTGTTCAAGAATTACAAAACAACTGCAATATGTTTGTTGCATCAGCCCGTCAGTTGGCTAAAGCCTTAGAAGTACCATTGGTTAATGATCTAGGATACACAAAGAGATATGTGCGCTGCCTACAGATATCAGAAGTTGTAAATAGTATGAAAGACTTGATAGATTACAGCAGGGAAACTGAGACTGGACCTATGGATAGCTTGGCAAAATTCCCTCGGAGAACAAATGGTTCTTCTGGACCTCGTGGTCAAGCACAACAGCATGAAGAACAATTACAGCAGCAGCAGCAACAGCAACAAATGTTGGCCCATAATTCAAATGGTGATCAAAACTCAGTACAAGCTGCTGCCATGCAAATTGCTTCTAGCAATGGTATGGTCAGTGTGAATAACAATGTCAACTCAGCATCCACATCAACCACCACAAGTACTATCGTTGGACTTCTCCACCAGAATTCAATGAATTCTAGACAACAAAATTCAATGAACAATGCAAGTAGTCCATATGGAGGTAGTTCCGTTCAGATTCCATCCCCAGGTTCCTCCAATACAGTGCCACAGGTCCAGCCAAACTCATCCCCTTTTCAATCACCAACGCCATCTTCTAACAACCCCCCTCAAACATCTCACCCTACTTTAACATCGGGCAATCACATGAGTACAACTAACTCAGCAACTAATATTTCCATGCAACAGCAGCAGCCATCTATTTCTGGTGATCCTGACCCTAGTGATACTCAAAGCTCAGTCCAGAAAATCATACATGAAATGATGATGTCCTCTCAGATTAACGGCACAGGAGGAATGATCGGTGTTGGTTCTCTTGGAAATGATGTGAAAAATGTAAATGGTATTCTGCCAGTGAGTGCCAATACAGGGCTCAATGGTAGCAATGGCTTGATGGGTAATGGGTCAATGAACAGTAATTCAGGCGTCGGGGTTGGTAATTACGGCACAATTGGTCTTGGTCAATCCGCTATGCCTAATGGAATGAGAGCTGCTGTGGTGAATAATTCAATCATGAATGGAAGGGGAGGAATGGCATCTCTTGCTCGGGATCAAGCTATGAATCATCAACAGGATTTGTCAAACCAACTACTTAGTGGGCTAGGGGCAGTAAATGGTTTTAATAATCTTCAATTTGATTGGAAACCTTCTCCTTGA 2730 0.437 MVPPGPPTPIGGAQSVSPSLLRSNSGMLGAQGGPMPSQTSFPSLVSPRTQFNNMNILGNMSNVTSILNQSFPNGAPNPGLSGPGSSQRGAIDTGAETDPLSTVGNGMSFNNSSSTFVQSNIVNAASSGQGQGQQFSNPSSNQMLPDQQHSQQLEPQNFQHSQQSMQQFSGPLNTQQLPPQQHFQSIRGGIGGMGPVKLEPQVNNDQLGQQQQPLQSLRSLSSVKLEPQQMQTMRTLGPVKMEPQHSDQPLFLQQQQQQQQQQQFLHMSSQSSQATAAQINLLRQHRLLQLQQQHQQQQLLKAMPQQRSQLPQQFQQQNMLMRSVKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQAFTQNATPNISVQELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETETGPMDSLAKFPRRTNGSSGPRGQAQQHEEQLQQQQQQQQMLAHNSNGDQNSVQAAAMQIASSNGMVSVNNNVNSASTSTTTSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQIPSPGSSNTVPQVQPNSSPFQSPTPSSNNPPQTSHPTLTSGNHMSTTNSATNISMQQQQPSISGDPDPSDTQSSVQKIIHEMMMSSQINGTGGMIGVGSLGNDVKNVNGILPVSANTGLNGSNGLMGNGSMNSNSGVGVGNYGTIGLGQSAMPNGMRAAVVNNSIMNGRGGMASLARDQAMNHQQDLSNQLLSGLGAVNGFNNLQFDWKPSP 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01449 909 MobiDBLite consensus disorder prediction 68 107 - -
Vian4g01449 909 MobiDBLite consensus disorder prediction 728 771 - -
Vian4g01449 909 Pfam LIM-domain binding protein 336 590 IPR029005 -
Vian4g01449 909 MobiDBLite consensus disorder prediction 126 178 - -
Vian4g01449 909 MobiDBLite consensus disorder prediction 678 771 - -
Vian4g01449 909 MobiDBLite consensus disorder prediction 12 46 - -
Vian4g01449 909 PANTHER LIM DOMAIN-BINDING PROTEIN 36 898 IPR029005 -
Vian4g01449 909 MobiDBLite consensus disorder prediction 594 634 - -
Vian4g01449 909 MobiDBLite consensus disorder prediction 583 634 - -
Vian4g01449 909 MobiDBLite consensus disorder prediction 678 720 - -
Vian4g01449 909 MobiDBLite consensus disorder prediction 1 46 - -
Vian4g01449 909 Coils Coil 607 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01449 Vian-Chr4 29135299 29143482 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01449 1 905 C2H2 Transcription Factor Family AT1G43850 59.746 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01449 - - gmx:100799771 1435.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01449 4 29135299 29143482 Vian4g01449 4 29135299 29143482 ECH