Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01437 ATGGGGAAGTTGACTCTTCCTTTTGTTGGAATGATTATGGCGGAGTTTGCTCAAGTTGGTCTAATCATATTGAGCAAAAAAGCCATGGCACAAGGAATGACCAATTTCATCTTCATCTTCTATTCCAACACAATCGCTGCCCTCCTTCTTCTTCCCATTTCCTTACTTATACACAGATTTGAACGTCCTCCAATCACCTTTTCCATCCTTTGTGAATTCTTCCTGCTTGCACTGCTCGGTTATTTGGCGCAGGCTTTTGGGTATGCTGGGATTTACTACGGCTCAGCTACACTCAGCACATCCATGCTCAACCTCGTTCCTGGTTTTACATTCGTACTTGCTGTTCTTTTTAGAATGGAACAATTAGATTGGAGAAAATTTAGCAGCCTAGCTAAGTCCTTGGGAACAATAGTATCAATTGCTGGTGCTTTTATTGTGACTTTGTACAAGGGCCCTGCACTTTTGCTGGGAATGTCATCGGCAAACTCATCTCCAAAGCAACTTTTATCGGTAGATTCTAATTGGATACTTGCAGGATTATTTCTCGCTGCAGATTGTATAATGGCTTCCGCATATATTATTTTACAGGCTTCTATTCTTAAAAAGTACCCAGCAGAGTTGATTGTTGTATTCTTTTATTGTTTCTTTGTGGCCATTCAATCTGCTGTGACTTGTTTAGTTGTGGAAAGAGACATCAGCGCTTGGAGCTTGGAACCCAAGTTAAGGTTGCTTGCAGTATTATACTCGGGAGTCATGGGCTCTGCATTTCAAGTTGGTATTATTTCTTGGTGTTTGCACAAGACAGGACCAGTTTTTGTTTCCATGTTCAAGCCCTTAGGAATACTCATATCAGTGGTTTTAGGTGTTTTCTTCCTCGGAGACGCATTCTATCTTGGAAGTCTGGTTGGTGCTATTGTGATTGTTGTCGGGTTTTATTCTGTATTATGGGGGAAAGCCGAAGACATTAAAGATGGTGGAGTGAGAATGATACGTTACCAGAAAGTGGGAGATGAGCTCCTTTTGGAGGAAAACGGCCATGAAGACACACAAGGGCCTTAG 1059 0.4183 MGKLTLPFVGMIMAEFAQVGLIILSKKAMAQGMTNFIFIFYSNTIAALLLLPISLLIHRFERPPITFSILCEFFLLALLGYLAQAFGYAGIYYGSATLSTSMLNLVPGFTFVLAVLFRMEQLDWRKFSSLAKSLGTIVSIAGAFIVTLYKGPALLLGMSSANSSPKQLLSVDSNWILAGLFLAADCIMASAYIILQASILKKYPAELIVVFFYCFFVAIQSAVTCLVVERDISAWSLEPKLRLLAVLYSGVMGSAFQVGIISWCLHKTGPVFVSMFKPLGILISVVLGVFFLGDAFYLGSLVGAIVIVVGFYSVLWGKAEDIKDGGVRMIRYQKVGDELLLEENGHEDTQGP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01437 352 Pfam EamA-like transporter family 180 315 IPR000620 GO:0016020
Vian4g01437 352 Pfam EamA-like transporter family 12 146 IPR000620 GO:0016020
Vian4g01437 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 149 - -
Vian4g01437 352 PANTHER WAT1-RELATED PROTEIN 7 322 IPR030184 GO:0016020|GO:0022857
Vian4g01437 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01437 Vian-Chr4 28869659 28873050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01437 6 321 Nodulin-like Gene Family AT5G40230 44.099 2.56e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01437 - - vun:114164332 640.188