Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01361 ATGCATTTGATTCTGCTACCATTTTCTATAGTGTTTTCTGGGTGCAAGCAGAGGAGTATCGAAGCCTTGATGCTGGTCAGGATTCATTCGGAATTGCGTCATAGGAATGTTGTAGAACTTTGTGACTGGTATAAGACTTCTCATCACACAGGTTTGATTTTAGAGCACTGCGTTGGAGGTGATTTGCTCACCATCTTACAACAATTGCACAAGTTATGTGATTTTGGATCGGCAAAAGAGTTGAAAAATATATCAACTCATTCTTCCTCGGTACCACTTGCAAAACGCGGAACACCCTGTTACATGGCTCCGGAACTTTTTGAAGATGTTGGAATCTATTCATACGCATCAGATTTATGGGCGCTAGGCTGTGTCTTATATGAGTGTTTTGCAAGAAGACCGCCCTTTATGGCAAGAGAATATAATAATATAAAATCCATTCTTTCAGATCCTATTCCACCTCTTTGTGGTCATCCCAGTCAACATTTTGTTGATTTAATCAATTCACTGTTGGTAAAGAATCCAGCAGAAAGAATACAGTGGCCTGAACTTTGTGCACATCCCTTCTGGAGAAGGGAAATTCCTCCTGTGGCTCTGCCTGCATTTGATTTTAATGAGAATGCCGAGAATGCCGAGAATGCCGAAGATGAAGCTGCTCAACCTGAAGATATGGCAAACCTTGATTTCAATGAGAATTCCGAGAATGCCGAAGATGAAGCACATGCTGTTATTACAGTTTCAATACCATCTCACCAGGATCAGAGGCAGGATCAGAGGCAGGATCAGGGGCAGGATCAGAGGCAGGATCAGAGGCGTCATACTGAAGAGTCATTGCCTCTTTTTTTGGTAAAATTTTTTATTAGAGGTTTTGTTTGGCTCCTTCCCAGTGAGTTTATTAAGTACGCCTTAAAGGACCAGAATGCGAGGGAGAAGAAACGGAAATTCTCATATGGTATTCTAGCCTTGATGACAGGACGTCTTTTGATGACAGGATGTCTTCTGAGTCTATCTGTTTTAGTAATGATAGGAAAAGATACCACCAAAGCGGATGTTTTCAGTTTCGACGTTGTTCTAATGGAGCTGTTAACTGGATTAATGGCACTTGATGAAGATAGACATGAGGAAAGCCAGTACTTGGCATCGTGGTTCTGGCATGTAAAATCAGACAAGGAGAAACTAATGACTGCTGTTGACCCTGCCCTTGACATAAAGGAATAG 1218 0.4171 MHLILLPFSIVFSGCKQRSIEALMLVRIHSELRHRNVVELCDWYKTSHHTGLILEHCVGGDLLTILQQLHKLCDFGSAKELKNISTHSSSVPLAKRGTPCYMAPELFEDVGIYSYASDLWALGCVLYECFARRPPFMAREYNNIKSILSDPIPPLCGHPSQHFVDLINSLLVKNPAERIQWPELCAHPFWRREIPPVALPAFDFNENAENAENAEDEAAQPEDMANLDFNENSENAEDEAHAVITVSIPSHQDQRQDQRQDQGQDQRQDQRRHTEESLPLFLVKFFIRGFVWLLPSEFIKYALKDQNAREKKRKFSYGILALMTGRLLMTGCLLSLSVLVMIGKDTTKADVFSFDVVLMELLTGLMALDEDRHEESQYLASWFWHVKSDKEKLMTAVDPALDIKE 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01361 405 SUPERFAMILY Protein kinase-like (PK-like) 20 197 IPR011009 -
Vian4g01361 405 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 16 68 IPR044591 GO:0000911|GO:0000914|GO:0008017
Vian4g01361 405 Gene3D Phosphorylase Kinase; domain 1 15 63 - -
Vian4g01361 405 MobiDBLite consensus disorder prediction 250 272 - -
Vian4g01361 405 Gene3D Transferase(Phosphotransferase) domain 1 64 280 - -
Vian4g01361 405 Pfam Protein kinase domain 70 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian4g01361 405 Gene3D Transferase(Phosphotransferase) domain 1 308 405 - -
Vian4g01361 405 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian4g01361 405 MobiDBLite consensus disorder prediction 254 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01361 Vian-Chr4 27509262 27521118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01361 60 189 MAP Kinase Kinase Kinase AT5G67080 33.333 1.50e-15 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Vian4g01361 Pkinase 6.7e-21 CL0016