Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01341 ATGGGTTACCTCTCTTGCAATGCCCAATCCGCAATCGCCACCTGCGACCCTCACTTCAAGAAGCACAAACCCCTCGCTGCCAAACCAATTCGCCACTTCAACTACGCCAAAATCTCCGTCGTCGCTTCTGGCTTCTCCGCCGATACCTTTCTGGGTAGAGGCAACCATGGCAGAGTCTACAAATCTACCCTTGACGGCGGAAAGCTCCTTGCCGCTGTCAAAACAACCAAACCGGTCTCTGCTTCGAAGAACGACTCCACTAAATGCACCGGCTGCTACAACTGCACAAGTCCCGTGGAGAGCAAGATCGAGATCCTCTCTCAAGTTCCGAGCCCCTCATAG 342 0.538 MGYLSCNAQSAIATCDPHFKKHKPLAAKPIRHFNYAKISVVASGFSADTFLGRGNHGRVYKSTLDGGKLLAAVKTTKPVSASKNDSTKCTGCYNCTSPVESKIEILSQVPSPS 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01341 113 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Vian4g01341 113 Gene3D Phosphorylase Kinase; domain 1 16 112 - -
Vian4g01341 113 SUPERFAMILY Protein kinase-like (PK-like) 26 83 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01341 Vian-Chr4 27208883 27209224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01341 16 74 Strubbelig Receptor Gene Family AT1G53730 34.328 2.43e-07 45.8