Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01329 ATGGCAGCTTTTACACCAATTGCTCTACAGTACTCATCTACATCATCTTTGCATTCTTTGCTACCTTCTTTAGAAGCTTCACGTGATCATAATTCATGGTGGGGGAAAGTGAGATCATACAAATCCGCAGGAAAAAGATCACTTCAACAGAATATCACAAGGGGTTTGACAATCCAGAGTGCAGCCACAAAACCAGCAAAGTCGCCAGCTGAAGAAGACTGGAAGGTTAAGCGAGAATATCTGGTGCAAAAAAGGGTAAGAAGTGTGGATGCAAAGGAAGCTCTGCGGCTTCAAAAAGAAAATAATTTTGTGATTCTCGACGTAAGGCCAGAAGCAGAGTTCAAAGAGGCTCATCCTCCAGATGCTATCAATGTGCAAATATACAGGCTTATAAAGGAGTGGACAGCATGGGACATTGCAAGACGTGCAGCATTTGCTTTTTTTGGTATTTTTTCCGGGACTGAAGAGAACCCTGAGTTCATCCAGAGTGTTGAAGCAAAGTTGGATAAAAATGCAAAGATAATAGTAGCTTGCTCAGCTGGAGGTACATTGAAACCATCACAAAATCTGCCCGAAGGTCAACAATCAAGGTCTCTCATAGCAGCTTACTTGCTGGTCCTTAATGGATTTTCCAATGTCTTCCATCTTGAAGGTGGTCTTTACTCGTGGTTTAAAGAGGATCTGCCAAGTGTTTCAGAGGAGTAA 705 0.4227 MAAFTPIALQYSSTSSLHSLLPSLEASRDHNSWWGKVRSYKSAGKRSLQQNITRGLTIQSAATKPAKSPAEEDWKVKREYLVQKRVRSVDAKEALRLQKENNFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFIQSVEAKLDKNAKIIVACSAGGTLKPSQNLPEGQQSRSLIAAYLLVLNGFSNVFHLEGGLYSWFKEDLPSVSEE 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01329 234 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 85 229 IPR036873 -
Vian4g01329 234 SMART rhod_4 89 229 IPR001763 -
Vian4g01329 234 FunFam Rhodanese-like domain-containing protein 14, chloroplastic 73 231 - -
Vian4g01329 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 39 233 IPR043186 -
Vian4g01329 234 ProSiteProfiles Rhodanese domain profile. 99 232 IPR001763 -
Vian4g01329 234 CDD RHOD 93 223 - -
Vian4g01329 234 Gene3D - 84 233 IPR036873 -
Vian4g01329 234 Pfam Rhodanese-like domain 91 224 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01329 1 229 Sulfurtransferasese or Rhodanese AT4G27700 67.391 2.53e-106 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01329 - - gmx:100788147 419.468