Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01272 ATGAAAGTTGTTAAGGAATGGTTGAAGGGGTCGAAGACTGTGCTTAGCATGTTTTTAGTGCAAGTTTTTGCAACAGGGATGCAGATTCTATCGAGGGTTATACTTGTTGAAGGCACTTCCATTTTCGCACTCATTGCCTACCGTCACGTTATTGCTGCTGTTTGTGTTGCCCCTTTTGCTTTCTACTTTGAAAGAGGCCGCCAAAAGAAGTTGAGGTGGTCGATTTGGTTCTGGCTCTTCCTTAACGCCTTAGTGGGGATAACACTGGCCATGGGACTGTTCTATTATGGTCTGCGAGATACATCAGCTACTTACTCTGTCAATTTTCTGAGCTTGGTTCCTATCTCCACTTTCATTTTCTCTATTATATGCAGAATGGAGAGGGTGGAGATTGGAAGATGGACGAGTAAAGTGAAGACAATAGGAGCAACTTTGTGTGTCGGGGGAGCATTAACGACTAGTCTGTACAAAGGGAAGGAATTCTATATTGGTCTAACTACCCATCATTCACACACTACATCAGTTCAGTCATCCAAAGTCAACATGCTTCGTGGCACTCTTTTTTTGCTTGGTAGCTGCTTCTCATACACAGCTTGGTTCATCGTTCAAGTGAAGTTGCTTGAAATTTTTCCATTCAAATATTGGGGAACGATGCTTACGTGCATTATAGCATCAATTCAAGCAGCAATAGTCGGAATATGCTTAGATTGCAGAAAAGTTACTTGGAGTTTAAAGTGGAATCTACAACTTATGACGATAATATACTCGGGAACATTGGCCACAGCTGCTACGTTTTGCTTAATTTATTGGGCAATTTCAATCAAAGGACCGACTTATCCCACAATGTTCAATCCATTGGCTCTTATTTTTGTGACCATATCAGAAGCTATCTTACTTGGTGAACCGATCAGTCTTGGCATCTTGGTGGGCATGATTTTGATCCTGACGGGGTTGTACTCATTTTTGTGGGGAAAAGAAAAAGAGACAGAAACTATGGTTGAAGCTTGTGGAGAGGTTTCAACAGCCATGGCACGAGAGTCTCTTGGACTTCATTCCACAGCCATGGTTGTACCGAGTATTTCACCTAGTAATGGCAAAAACGATAGAAATTGA 1113 0.4187 MKVVKEWLKGSKTVLSMFLVQVFATGMQILSRVILVEGTSIFALIAYRHVIAAVCVAPFAFYFERGRQKKLRWSIWFWLFLNALVGITLAMGLFYYGLRDTSATYSVNFLSLVPISTFIFSIICRMERVEIGRWTSKVKTIGATLCVGGALTTSLYKGKEFYIGLTTHHSHTTSVQSSKVNMLRGTLFLLGSCFSYTAWFIVQVKLLEIFPFKYWGTMLTCIIASIQAAIVGICLDCRKVTWSLKWNLQLMTIIYSGTLATAATFCLIYWAISIKGPTYPTMFNPLALIFVTISEAILLGEPISLGILVGMILILTGLYSFLWGKEKETETMVEACGEVSTAMARESLGLHSTAMVVPSISPSNGKNDRN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01272 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Vian4g01272 370 PANTHER WAT1-RELATED PROTEIN 13 332 IPR030184 GO:0016020|GO:0022857
Vian4g01272 370 Pfam EamA-like transporter family 184 321 IPR000620 GO:0016020
Vian4g01272 370 Pfam EamA-like transporter family 13 137 IPR000620 GO:0016020
Vian4g01272 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01272 Vian-Chr4 25657115 25663172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01272 15 326 Nodulin-like Gene Family AT1G09380 34.375 1.22e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01272 - - vun:114164630 690.263