Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01253 ATGGACGGAATGCAAGAAAGAAACTCACAGCTTGGAACTGATATTGGGTCCTCCTTATCAAAGCTAATATTAACCAGTGGCTCAAACACCCTGGACTCAATCTTCTCAGATTGTCCCCCAACAAACGCCGCCAGTAGCAACTCCGTGTTGGACTATTTAGAACCCTTTGGATCTTCCGGGTTTGAGCCTTTGGGCTCTTCCGTCTACCTTCGCCAAAAGGACATCCTCCAAAAGTTCTACCAAGAAAGCCGGGGGAACGGGAACGGCAACGGCAACGGATCTCTTCTTCCCACTTCCTTGGCAAACCCACTTCCCCAATTTGAAGGACCCGACCAAGCTGGGGTTCGGAGATTCCGCCAGATTGAACGCCTTGAAGAGCTCCGTCGATGCCAAAATGCAGGCCATATGTCAGAAGAGTCTGAAATTGGAAATTCAATTAGCATTTTGTCGGGTTATGTTGATCATTTCCAGTGCCTTGAATCTGAGGATGCCGGATGGGGTTGTGGGTGGCGTAACATTCAAATGCTTAGTTCTCACGTGCTAGTGCAAAGACCTGAAGCAAGGAAAGCTTTGTTTGGTGGTTCGGGATTTGTTCCTGATATCTTGTCGCTGCAAAGGGCAAGAGTAGTGGATTTTGGTCCTAAGGAATCCCAATCCATTCCAGGTTCTAGCGCTGACAATGCCGGGAATGAAACAAGTGTTCATTTGGTAAAAAAGAAAGATAAAGGGGGCAGGGGTTATCAAGTTCTCATGGACTTTGTGTGGAATTACTTTTTGGATGAAAACTCAATCCAATTTGGCCAAAAACATGTTGTGATCAGTGAGAAAACGCCTTTATACTTCCAACATGACGGTCACTCAAGAACAATAGTTGGAATTCAAGTCAACCATCAACAAAAAAGACATCTGCAATATAATCTCCTAATTTTGGACCCTGCTCAAAAATTAAAGGGAAAAAGTACAGGATGTAATGAAATTAGACCGACAATTCAAAATTCATGCTAG 1005 0.4448 MDGMQERNSQLGTDIGSSLSKLILTSGSNTLDSIFSDCPPTNAASSNSVLDYLEPFGSSGFEPLGSSVYLRQKDILQKFYQESRGNGNGNGNGSLLPTSLANPLPQFEGPDQAGVRRFRQIERLEELRRCQNAGHMSEESEIGNSISILSGYVDHFQCLESEDAGWGCGWRNIQMLSSHVLVQRPEARKALFGGSGFVPDILSLQRARVVDFGPKESQSIPGSSADNAGNETSVHLVKKKDKGGRGYQVLMDFVWNYFLDENSIQFGQKHVVISEKTPLYFQHDGHSRTIVGIQVNHQQKRHLQYNLLILDPAQKLKGKSTGCNEIRPTIQNSC 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01253 334 PANTHER UFM1-SPECIFIC PROTEASE 2 142 208 - -
Vian4g01253 334 Gene3D - 130 225 - -
Vian4g01253 334 Gene3D - 232 329 - -
Vian4g01253 334 MobiDBLite consensus disorder prediction 82 101 - -
Vian4g01253 334 Pfam Peptidase family C78 146 207 IPR012462 -
Vian4g01253 334 Pfam Peptidase family C78 242 315 IPR012462 -
Vian4g01253 334 MobiDBLite consensus disorder prediction 82 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01253 Vian-Chr4 25358819 25367829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01253 2 85 AP2-EREBP Transcription Factor Family AT1G64380 41.667 2.17e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01253 K24134 - gmx:100781936 274.248