Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01245 ATGGAGGAGGTTTTTGTTGCATTGAAACTGGTTTCAGTTGCTGTTGTGGGGGTTCTAAGCTGGGTACTCTATGGGTATGGTCGTGTGTGGTATGAGTCTCAGAGGGTGAGAAAAAGGATACTAAAGCAAGGAATAAAAGGGCCTCCACCTTCTTTTCTGCATGGAAATCTGCCTGATATTCTGAAAATTCAAGCTCAGGCTGCTAGCCAGGCCAAAGCTTCTGCTTCAACCTCCAACCATTCTGATCAGCTTGTGGCTCATGACGACACTGCAACCCTCTTTCCTTATTTTGAGCACTGGAGGAAAGAATATGGTTTACTGTATACTTACTCCACAGGGCTGAAGCAGCACCTGTATGTGAATCAACCGGATCTAATAAAGGAATTGAATCATTGCATCACTTTGGTTCTGGGTAAGCCTGGTTACTTAACAAACAAACTTGCACCTATGCTTGGCAATGGCGTTTTGAGAGCCAATGGTAACAGTTGGGCACAGCAGAGGAAACTTGTTGCAGCTGAATTCTTCATGGACAAAGTTAAGGGTATGGTGGACTCAATGATAGAGTCAACGCAGCCATTACTACTGAAATGGGAGCAAATTATTGAGAGCCAAGGAGGGGCCACAGCTGAAATTAAAGTGGATAAAGATCTCATAGGTTTATCAGCTGATGTTATTTCAAGGGTTTCATTTGGCCATTCTTATTATTCTAAGGGAAAGGAAGTCTTCTCCAAGCTTAGAAGAATACAGAAGGCCCTGACCAAGGATACTGGCTTCCTTTTTGGCATCAGTTTTCGTGAGAAACTGAATTTCTGGTCAAATAAGAAAAATGAGATAGCGAATTTGGAGAAAGAGATAGAGTCACTGATATGGGAGTTAGTGGAGGAACGCAAGAAAGAATGCTCAGAGGCATCCTCCTCATCACAGAAGGATTTGATGCAGTTACTGTTGGAAGCAGCCACGAGTGATCAGAGTCTGGGGAAGGACTTTTCCAAAAGCTTCATTGTGGATAACTGCAAAAACATTTACTTTGCTGGCCATGAAACCACTTATGTAGCAGCCTCCTGGTGTTTGATGCTTCTTGGTTTGCACACAGATTGGCAGACTCGTATAAGGGCTGAGGTAGCTGAACATTGCCCAAATGGTATACCAAATGCAGATTCTCTCCCTCAGTTGAAAACGCTGGGTATGGTGATTCAAGAAACGCTACGTTTATACCCACCAGCATCCTTTGTGTCAAGGGAGGCATATGAAGATATCCAAATTGGACACCTGAATGTTCCTAAGGGTGCTTTTCTGTGGACTCTGATCCCAACCCTACACAGAGATCCTGAAGTCTGGGGACCAGATGCTAATGAGTTTAAACCAGAAAGGTTCAGTGAGGGAGTGTCCAAGGCTTGCAAGTTTCCAAGTTCTTATGCGCCATTTGGGTTGGGTACTCGCTTGTGCTTAGGAAAGAACTTTGCACTGGTTGAATTGAAGGTTGTGCTAGCCCTTATCATCTCCAGGTTTAGCTTCACTCTGTCTCCTAATTATAGGCACTCTCCAAAATATATAATGATTGTGGAACCAGAACATGGTATTGATCTTATCATGCAGAAGATCTGA 1605 0.4361 MEEVFVALKLVSVAVVGVLSWVLYGYGRVWYESQRVRKRILKQGIKGPPPSFLHGNLPDILKIQAQAASQAKASASTSNHSDQLVAHDDTATLFPYFEHWRKEYGLLYTYSTGLKQHLYVNQPDLIKELNHCITLVLGKPGYLTNKLAPMLGNGVLRANGNSWAQQRKLVAAEFFMDKVKGMVDSMIESTQPLLLKWEQIIESQGGATAEIKVDKDLIGLSADVISRVSFGHSYYSKGKEVFSKLRRIQKALTKDTGFLFGISFREKLNFWSNKKNEIANLEKEIESLIWELVEERKKECSEASSSSQKDLMQLLLEAATSDQSLGKDFSKSFIVDNCKNIYFAGHETTYVAASWCLMLLGLHTDWQTRIRAEVAEHCPNGIPNADSLPQLKTLGMVIQETLRLYPPASFVSREAYEDIQIGHLNVPKGAFLWTLIPTLHRDPEVWGPDANEFKPERFSEGVSKACKFPSSYAPFGLGTRLCLGKNFALVELKVVLALIISRFSFTLSPNYRHSPKYIMIVEPEHGIDLIMQKI 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01245 534 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g01245 534 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g01245 534 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g01245 534 PRINTS P450 superfamily signature 482 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g01245 534 PANTHER CYTOCHROME P450 FAMILY MEMBER 27 526 - -
Vian4g01245 534 Coils Coil 271 298 - -
Vian4g01245 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Vian4g01245 534 SUPERFAMILY Cytochrome P450 90 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g01245 534 Gene3D Cytochrome P450 29 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g01245 534 Pfam Cytochrome P450 91 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g01245 534 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g01245 534 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g01245 534 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g01245 534 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g01245 534 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian4g01245 534 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01245 Vian-Chr4 24998407 25003083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01245 125 527 Cytochrome P450 AT5G24900 54.167 8.08e-161 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01245 K20661 - gmx:100815776 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01245 4 24998407 25003083 Vian4g01245 4 24998407 25003083 ECH