Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01226 ATGAACAACACCCTCATCACAGAGCTTCTTCTCGGTCTCGACTATGCCACTCAGCTCAAGTTTCTGCTTCAGAAACCTGTTGACCCAGATGCCTCTGCTGCAGCTAAGGAACTGCTCACCAATGTGCACAGATCTTTCGCTCAAACTCTCTCTATCTTGACTTCTTCCCACCCTGCAATGCCTCAAGACCAGGTTGCTCAGAATCTCCTCATTTCTGGGGAAGATGCCTCGCAGGCTGCAAGCATTGATCCCAGGTCTGACGATTCAACTGAGAGTAGAAAGAGATCGTTTCCCCTCTCAAAGGATCGCAGAGGTTCCTACAAAAGAAGGAAGACTGAACAGACATGGGCTATAGTTTCCCAAACTACTGAAGATAATCATGCGTGGAGAAAGTACGGACAAAAGGATATTCTAAATTCTCAGTTTCCCAGGAGTTACTTCAGATGCACTAGGAAGTTTGAACAAGGTTGCAAGGCCACCAAACAAGTGCAACGGTTAGAAGAGAATCCTGATATGTACAATATTACGTACATTGGGTTTCACACATGCAAAGACACCCTCAAGGCTCCACAAATGGTCACATGTTCTGAAACTTGGGACTCATTCCTTGAGAATTCCCACGAAGATTTAAATGTTCCAAATGAACAAAAGCAACTCGATCCTCCTGTGAGATCACAAAGCCCAATTGTTAAACAAGAATCTCTCAGTGATGAGACTGATCCCAGTGATCTTACAGATGCCATGTGGTCTGAGTTGAAGGATTTAGAACTGTCCAATGACAAGCCTGACTTGAAAATATCATCTGAAAATACAGATGCATTCATGTACTTGCTCTCGGAGTTTGGACATGAATTTTGA 858 0.4394 MNNTLITELLLGLDYATQLKFLLQKPVDPDASAAAKELLTNVHRSFAQTLSILTSSHPAMPQDQVAQNLLISGEDASQAASIDPRSDDSTESRKRSFPLSKDRRGSYKRRKTEQTWAIVSQTTEDNHAWRKYGQKDILNSQFPRSYFRCTRKFEQGCKATKQVQRLEENPDMYNITYIGFHTCKDTLKAPQMVTCSETWDSFLENSHEDLNVPNEQKQLDPPVRSQSPIVKQESLSDETDPSDLTDAMWSELKDLELSNDKPDLKISSENTDAFMYLLSEFGHEF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01226 285 MobiDBLite consensus disorder prediction 212 243 - -
Vian4g01226 285 ProSiteProfiles WRKY domain profile. 124 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian4g01226 285 SUPERFAMILY WRKY DNA-binding domain 120 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian4g01226 285 Pfam WRKY DNA -binding domain 124 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian4g01226 285 SMART WRKY_cls 123 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian4g01226 285 Gene3D WRKY domain 108 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian4g01226 285 MobiDBLite consensus disorder prediction 76 113 - -
Vian4g01226 285 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 211 IPR044810 GO:0003700
Vian4g01226 285 MobiDBLite consensus disorder prediction 86 111 - -
Vian4g01226 285 MobiDBLite consensus disorder prediction 218 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01226 Vian-Chr4 24380839 24382835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01226 5 224 WRKY Transcription Factor Family AT3G56400 39.910 8.95e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian4g01226 WRKY 1.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01226 - - vun:114164744 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g02032 7 33328822 33337466 Vian4g01226 4 24380839 24382835 PCT