Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01196 ATGATGTCAACAACGTCTCAAACTAGTGTTAACCATAGCTTGTTTGAAGAGCAAGATCAGATCCCAACGCAGATGGAGTTCAATATTCCTTTTCCATCAACCCAGGCCTTCCCTCCTTTGGGTTGCCATCAATCTTTGAAATCCATCAGTGCACTGGTTCCTTCACTTTCATCTGAACCTGCTTCTTCTTCTGCGAATTTTGCAGAAACCCTATTTTCAACCGCTGTTCAAAGACAACGAGAAGATCTCACTTCAAGTTTGATAGGAGGAGGAGGAGGAGGACAGCTACTTTCCTTGAACAGATCGAGACTGAATCCATGGGCATGGGAAGAAGTAACCGATTGCTTGATGAGTAAAAGAATGGGAGGAGGTGATAATCATCATCTAGGGGTTTCCGCCATGAAGATGAAGAAAATGAAGGCAAGGAGAAAGGTGCGGGAGCCAAGGTTTTGCTTCAAGACTATGAGCGATGTGGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAATACACAACACCCAAGAAGCTACTACCGTTGCACCCAAGATAACTGTCGAGTGAAGAAACGCGTGGAGCGGTTGGCGGAGGATCCAAGGATGGTGATAACCACATATGAGGGGAGACATGTGCACTCGCCATCAAATGAACTCGAAGACTCACAATCTCCTTCTGAACTTAGTAGCTTCTTGTGGTAG 717 0.4561 MMSTTSQTSVNHSLFEEQDQIPTQMEFNIPFPSTQAFPPLGCHQSLKSISALVPSLSSEPASSSANFAETLFSTAVQRQREDLTSSLIGGGGGGQLLSLNRSRLNPWAWEEVTDCLMSKRMGGGDNHHLGVSAMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNELEDSQSPSELSSFLW 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01196 238 ProSiteProfiles WRKY domain profile. 156 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian4g01196 238 FunFam WRKY transcription factor 57 147 221 - -
Vian4g01196 238 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 36 223 IPR044810 GO:0003700
Vian4g01196 238 SUPERFAMILY WRKY DNA-binding domain 153 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian4g01196 238 MobiDBLite consensus disorder prediction 223 238 - -
Vian4g01196 238 Gene3D WRKY domain 148 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian4g01196 238 SMART WRKY_cls 161 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian4g01196 238 MobiDBLite consensus disorder prediction 213 238 - -
Vian4g01196 238 Pfam WRKY DNA -binding domain 162 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01196 Vian-Chr4 20967292 20970283 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01196 131 238 WRKY Transcription Factor Family AT4G39410 78.761 5.10e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian4g01196 WRKY 1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01196 - - gmx:100127389 380.178