Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01163 ATGTCACGCTGTCAGTTCCTCCGATATTCCTTTCTTTCTATTTTTCTCGACACTCCCATGGCTGCATCGCCTATGACATGCAACCTCAACCTGAGTACTGTTTCAAGTGGTTTCTGTATTGCGGACCTGCGGCTTTATATCCCAATGCCACTTTTGAGGAGAAAGCCTTTTGCCCTTGCTGAACCACCGAATGATTTGGAGCCATGCGAGAGTCTTTTTCGAATTCGATTTACTAAAGAAGTATTTCGAGATTATAAACAGAAGTTTATGGGAGGAGAACCTGCCTCATTCCAAGGCATGCTCCCTTTGAAGGACCTTGTTGATTCTATTGCTGATAAGTTGAAGGAGCAGTTGGTTGAGGGCTCTCAATTGTATGGAAAAAAGAATGAAAGAGTGTGTCCTTGCAAAATATTGAGAGTGATGCAGAAAGATGCTGAAACTGTCAGCTATGTGGTGGCTTGGCTAGATGAAAGCAATAATGTTATTGAAAGAGCAGAAGTCAGTTCTCAAGATTTGGTGCAGAAGAAGCCACCTTTTAGTAGAAATATTTTGAAGTCTTTTGTCCGTGAATGTACATATCGAAATGCTCCTTGGGTTTTACATGATAAACTTGCAAAAAATCATGGAATCTCAACTGACATTCCAGAGGAGTTAAGAGGAAAGGTTTCCTTTAACAATGGACTCGTGGTCTTCACCAAAAAAAGAAAGCATGAGGAAGAGTCTATCAAATATCCAATTGATGATCTATTAGTGAAGCCTAGTCCAGATGATCCAGTTTTCAGTAGTCGTCCTTCTCCATCAAGAGACTTTAATGTTCCAATTCATTGTGTAGGGGATCTCTTAACGGTTTGGGACTTTTTAATGTCTTTTGGTAAACTGTTACAATTATCACCGTACTCTCTCAAAGATTTTGAAAACGCAATCTGTCACAAGGATAGCAATGTTGTTCTCCTGGTGGAATCTCTTGCAGTACTCTTTCGTGTGCTCATCAAAGGTGATGATGAATACTATGCAGCTGTTCAAGATAAATTACCGAAGAAGATTACAATGATTAGTTGGAAAGACTATTTATGCAAGTTTTTAGAAATGATCAAAATTCCCAAGCTGCAGCAGTATGAAGCAACAATTAAACGGGGACGTTATAGTTATGTAGATGTCAATGCTAAATTAGAAATCTTTTGCGAATTAGTCAATCGAGCCCTTGATACAGCTATTGTCAGGGAAAAATTGCATGAGTTTATTGAACAAAGGCGGGTACTGGGAGCTGCTAAAAGGGAAGAAGCAATTGAAGCTTCTGCAAAGAGAAGAAAAGTAAAGGAGCAGTTGAAAGCTGATTCTGGAAGCACCTGTGGTGAGAATGGGCATGATCTTGATCAGGATGCAACTGTCTCAGCTGATAATAGTCACAGAATACAGAATGGTAGTATTAGAAAGAATAGAAACAGTGAGACAGAATCATCTACGCAAAAATATGCATTCGATAGTGGTATCAAGCATTCAAACCTTGCTTCAAAAATGTCAGCTGAAAAGTTTGATTCTGAGCTTAATCGATCTGCACTATGCGGAAAAGTATACAATAGAAAGGAATCACAGAAACAACCAATAGGTATGGACAGATATTATAATAGGTATTGGTGGTTTTACCGTGATGGAAGGATATTTGTTGAAAGTCCTGAATCCAATGAGTGGGGATACTACAGTAGCAAAGGAGAGCTTGATGGATTGACGAGTTCACTGAATTGCAAAGGCGAGAGGGAGAGGGCACTGCTAAAACAACTGAAAAAATATTATGGTAGAATATGCTCGGAATTGCAGAAAAATTCAAAGGATTTGTTGCATAAGACTACCCTGGATGATTCTGTGGTCAGAAGGTCTACACGTGTTCGCGCACCACCTAGGAAAAATCCTGCCAAGGCTTTCCTTAGATATGTAAACAAGTGGAAAGAAGAGTAA 1953 0.3948 MSRCQFLRYSFLSIFLDTPMAASPMTCNLNLSTVSSGFCIADLRLYIPMPLLRRKPFALAEPPNDLEPCESLFRIRFTKEVFRDYKQKFMGGEPASFQGMLPLKDLVDSIADKLKEQLVEGSQLYGKKNERVCPCKILRVMQKDAETVSYVVAWLDESNNVIERAEVSSQDLVQKKPPFSRNILKSFVRECTYRNAPWVLHDKLAKNHGISTDIPEELRGKVSFNNGLVVFTKKRKHEEESIKYPIDDLLVKPSPDDPVFSSRPSPSRDFNVPIHCVGDLLTVWDFLMSFGKLLQLSPYSLKDFENAICHKDSNVVLLVESLAVLFRVLIKGDDEYYAAVQDKLPKKITMISWKDYLCKFLEMIKIPKLQQYEATIKRGRYSYVDVNAKLEIFCELVNRALDTAIVREKLHEFIEQRRVLGAAKREEAIEASAKRRKVKEQLKADSGSTCGENGHDLDQDATVSADNSHRIQNGSIRKNRNSETESSTQKYAFDSGIKHSNLASKMSAEKFDSELNRSALCGKVYNRKESQKQPIGMDRYYNRYWWFYRDGRIFVESPESNEWGYYSSKGELDGLTSSLNCKGERERALLKQLKKYYGRICSELQKNSKDLLHKTTLDDSVVRRSTRVRAPPRKNPAKAFLRYVNKWKEE 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01163 650 MobiDBLite consensus disorder prediction 434 490 - -
Vian4g01163 650 Pfam DDT domain 275 331 IPR018501 -
Vian4g01163 650 ProSiteProfiles DDT domain profile. 274 335 IPR018501 -
Vian4g01163 650 MobiDBLite consensus disorder prediction 446 490 - -
Vian4g01163 650 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 235 648 - -
Vian4g01163 650 SMART testlast3 274 335 IPR018501 -
Vian4g01163 650 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 531 596 IPR028941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01163 Vian-Chr4 20031150 20036293 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Vian4g01163 WSD 4.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01163 - - gmx:100784607 854.358