Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01157 ATGGCCTTCCTCGAGTTTCCCAACACGTGTGAAGTTCCATATAAAGATGGAGATTTTAATGAAGAGCTTCCAACTCTTAATTTGACTTTTATTCCAATGTTATTAGTTGTGGATGCATTAGAAAAGACAATGTTCCTAGGGTACAGAGAACGGATTGTTGCTATCAATGTTCTGCATCGTGGGAGTACTTTAGAAGAAAGAGTTTCACAGGAGAACCGTTTTGCGTGCGAAGTTAATATGATGTCTCATGTCCACCATGAGAATCTTGTGAAGGTGAGTAGTGTGTTTTTTATGTGGGATATATTAGCATATCTTCAAAGGACTAATAGATGCATGTTTCTGAAGATAATGCATTTCTTTGTTTCTTTCAGTTTATTGGACCTTGTAAGGAACCTCTAA 399 0.3709 MAFLEFPNTCEVPYKDGDFNEELPTLNLTFIPMLLVVDALEKTMFLGYRERIVAINVLHRGSTLEERVSQENRFACEVNMMSHVHHENLVKVSSVFFMWDILAYLQRTNRCMFLKIMHFFVSFSLLDLVRNL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01157 132 Gene3D Phosphorylase Kinase; domain 1 43 104 - -
Vian4g01157 132 SUPERFAMILY Protein kinase-like (PK-like) 48 109 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01157 Vian-Chr4 19881236 19881832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01157 48 92 MAP Kinase Kinase Kinase AT5G01850 57.778 1.13e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01157 - - gmx:100799533 80.8777