Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01154 ATGGCTTCCCTTTTCACCTTCGTTTTGTCCCTCTTGCTTGTGGCACAATGCTGCTGGTGTCTAACATTGCCCAAGAAGACATACATAGTTCACATGAAACAGAACAATAAACCTTCAATCTACCCTACTCACACTGACTGGTACACTGCAAATCTTCAATCTTTAACCACTGATTCCGATCCCTTGCTTTACTCTTATACTCATGCCTACAACGGCTTTGCGGCGTCGCTGGCCGAGGAACAGGCACAGGAGCTTCTCAGATCCGAGGATGTTCTTGGAGTGTACGAGGAGACAGTCTACCAACTGCACACCACGTGTACGTCGCAGTTTTTGGCGCTCGAGAGAGAGACGGGGCTGTGGGAAGGTCACACCGCGCAGGACCACAACCAAGCGTCGCACAACGATATCATGGGGGACGGCGTCGACGTGCTCTCGCTCTCCCTCGGCGGTGGCTCTGCGCCGTACTTTCACGACACCATTGCTGTAGGCGCGTTCGCAGCGGTGGTAAGGGGGATCTTCGTCTCCTGCTCCGCCAGGAACAGGGGCCCCGAGAAGGCCTCACTTGCAAATGTTGCACGCTGGATAATGACCGTTGGGGCTGGGACGTTGGACCGTGATTTCCCCGCCTTCGCCGTGCTCGGCAACAAAAAACAGTACTCCGGTGTTTCGCCTTACAGCAGAACCAGAATGGGGACCGAACCGATGGGGTTGGTTTATAATAAAAGGTTGAACCAGTCCGGAAGCGTCTGCATGCCCGATTCACTCGACCCGAGTTTAGTTCGTGGGAAGGTGGTGGTTTGCGATAGAGGGATTAACGCGCGCGTGGAGAAGGGCAAGGTGGTGCGTGTCGCAGGTGGGGTAGGGATGATTCTGGAAAACACAGAAGCGAGTGGGGAGGAGTTAGTAGCAGACAACCACCTTCTACCGGCTGTGGTGGTGGGAAGAATCGTGGGGGATCAGATCAGGAAACACGCTTCCTCAGATCCTAATCCAACGGCAGTTCTCGGTTTCCGTGGAACAGTTTTGAACATTAGACCTTCACCAATGGTGGTGCCTTGGACTGAGCGGCTGGTCCGATGGAGGCTCTACTCTACCGGAGAAGACGAACGACACAAGCAACGTGACAGAGAGTGA 1134 0.5432 MASLFTFVLSLLLVAQCCWCLTLPKKTYIVHMKQNNKPSIYPTHTDWYTANLQSLTTDSDPLLYSYTHAYNGFAASLAEEQAQELLRSEDVLGVYEETVYQLHTTCTSQFLALERETGLWEGHTAQDHNQASHNDIMGDGVDVLSLSLGGGSAPYFHDTIAVGAFAAVVRGIFVSCSARNRGPEKASLANVARWIMTVGAGTLDRDFPAFAVLGNKKQYSGVSPYSRTRMGTEPMGLVYNKRLNQSGSVCMPDSLDPSLVRGKVVVCDRGINARVEKGKVVRVAGGVGMILENTEASGEELVADNHLLPAVVVGRIVGDQIRKHASSDPNPTAVLGFRGTVLNIRPSPMVVPWTERLVRWRLYSTGEDERHKQRDRE 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01154 377 Gene3D - 204 342 - -
Vian4g01154 377 FunFam subtilisin-like protease SBT1.5 204 342 - -
Vian4g01154 377 SUPERFAMILY Subtilisin-like 123 234 IPR036852 GO:0004252|GO:0006508
Vian4g01154 377 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 124 IPR045051 -
Vian4g01154 377 CDD PA_subtilisin_like 212 333 - -
Vian4g01154 377 Gene3D Peptidase S8/S53 domain 120 351 IPR036852 GO:0004252|GO:0006508
Vian4g01154 377 Pfam Peptidase inhibitor I9 27 103 IPR010259 -
Vian4g01154 377 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 103 IPR037045 -
Vian4g01154 377 Pfam PA domain 258 321 IPR003137 -
Vian4g01154 377 FunFam Subtilisin-like protease SBT1.9 20 103 - -
Vian4g01154 377 SUPERFAMILY Protease propeptides/inhibitors 25 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01154 Vian-Chr4 19778223 19779481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01154 139 356 Subtilisin-like Serine Gene Family AT2G05920 67.431 6.65e-99 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01154 - - gmx:100797543 324.324