Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01143 ATGGAGATAAATATGAGAAAAATGGAAGAAGCAACCAATAAATCGGATGACTACATAGTATGTTATGCACCTACCATGATAACAACAAATGGGGTGTGGCAAGGAGACAACCCTTTGGATTATTCTCTCCCTCTTTTCATCTTGCAATTGACTTTAGTTGTGATTGCCACCCGCTTATTTGTGTTCATACTCAAACCTTTTCGCCAGCCACGCGTAATTGCTGAAGTCTTGGGTGGAGTAGTATTGGGTCCTTCGGTGCTTGGACAAAACGAAACATTTGCCAATGCAGTGTTTCCTCTAAGAAGTGTTATGGTGATTGAAACAATGGCAAATATTGGTCTCCTCTATTTTCTGTTCTTGGTAGGGGTGGAAATGGACATAACAGTGATGCGAAGCGTGGGTAGAAAAGCTGTGGCTTCGGCAATGGCTGGCATGATTTTACCTTTCCTCGTTGGAGTGGCCTTCTCCTACCTTTTGGCCAAAAAAACTGATACCCATATAAACCAAGGCACATACATCCTATTCCTTGGCGTTGCTCTCTCTGTCACTGCATTTCCTGTCCTTGCTAGGATCCTGGCTGAGCTTAAACTCGTTAACACAGAGTTGGGGAAGCTTGCTCTTTCAGCTGCACTCATCAATGACGTGTGTGCTTGGGTTCTGTTAGCTTTGGCCATTGCACTAGCTGAGAACAATGCAGCTTCATTGGCTTCTCTCTGGGTTCTACTCTCTGGTGCTGCATTTGTGGCATTTTGTGTTTTTGCTGTTCGACCAGCAGTTGAATGGCTGATTAGGAAAACCCCTGAAGGAGAAACTTTCAGTGAGTTTTATATATCTCTTATTCTAGCTGGGGTCATGGTCTCAGGCTTCATCACTGATGCAATTGGAACTCATTCTGTTTTTGGAGCTTTTGTGTTTGGTTTGGTAATCCCAAATGGACCACTCAGTTTTACTCTTGTGGAAAAGCTTGAGGACTTTGTTTCCGGACTTCTGCTACCTCTCTTTTTTGCCATAAGTGGGCTAAAAACCAACCTAGCACTCATTAATGGCTCATACACCTGGGCGATTCTTATTCTAGTCATTTTTCTGGCCTGCATTGGCAAAGTTCTTGGCACCCTATTGATTGCACTGCTTTATCAAATGCCAATACGTGAAGGAGCTGCCCTTGGTTTACTCATGAACACAAAAGGTCTCGTTGAAATGGTCGTGCTTAATGTTGGGAAGGACCAGAAGGTTTTTGATGAAGAATCATTTGCAGTTATGGTCGTTATAACAGTAATAATGACTGCCATTATTGTACCTGCCATATCAATCATTTATAGGCCCTCAAGAAGCAGCATATATTACAAAAGAAGAACAATTGAGATATCAAAATCAAATACTGAGTTCAGACTCCTAGTGTGCATCCATACCCCTCGAAACGTTCCAACAATGATAAACCTTCTTGAAGCCTCTAACCCATCAAAGAACTCCCCAATATGTGCCTATGTGCTCCATCTGGTGGAACTCAGTGGTCGAACATCAGCCATGCTCATTGTCCACAACACAGCAAAACAAGACCTCCCTGCCCTTAACAGAACCGAAGCTCAATCTGACCACATAATCAAAGCCTTTGAAAACTACGAGCAGCATGCTTCATTCATCGCAGTTCAGCCCTTGACAGCCATCTCTCCCTATTCCACCATGCATGAAGACATATGCAATTTGGCAGCAGACAAACGTGTGGCCCTCATCATTGTTCCTTTTCATAAACAACAAACAGTCGATGGTGGCATGGAAGCTACAAACATGGCCTATAGAGCCATCAACCAGAATGTACTAGCAAATGCACCTTGCTCAGTAGGAATTCTAGTAGATAGAGGCTTAAGTGGCTCTAATCGTTTGGCTGGAAATCAAGTATCTCATCACATAGCAGTATTGTTTTTCGGAGGCCCAGATGATAGAGAGGCATTGTGCTATGGATGGAGAATGATGGAACATCCAGGGATTAGCCTCACCATAATGCGTTTTCTCCCAGGTGAACAGGCAGAGCCGTCCTGCCCACAACAAGACAGCAATAATATGGATGGACCAAGGATGCTGACAGTGCAAACAGATAGGGATATACAGAAGAAACTTGATGAAAAACTTCTAGAAGAATTTAGGATGTCATGTGGGAGTGAAGATGCAGTTGATTATGTTGAGAAGGTAGTTAACAATGGGGAAGACACAGTGGCTGCAATAAGGAGCATGGATGATGTTCATGATCTTTTCGTTGTTGGGAGAGGTCAAGGGATGATATCACCTCTCACTGCAGGACTCACTGATTGGAGTGAATGTCCTGAAATGGGGGCCATTGGAGATTTGCTAGCATCTTCAGATTTTGCTGCCACTGCTTCAGTTTTGGTGGTGCAACAATATGTTGGGCAAGTATATCCAGGAACGGAAACACCTAATGGTGATGATTATATCGATTTTAGCCATTGTTCTACATCACCTGCAGCTAAAGTATACAGTTAG 2496 0.4335 MEINMRKMEEATNKSDDYIVCYAPTMITTNGVWQGDNPLDYSLPLFILQLTLVVIATRLFVFILKPFRQPRVIAEVLGGVVLGPSVLGQNETFANAVFPLRSVMVIETMANIGLLYFLFLVGVEMDITVMRSVGRKAVASAMAGMILPFLVGVAFSYLLAKKTDTHINQGTYILFLGVALSVTAFPVLARILAELKLVNTELGKLALSAALINDVCAWVLLALAIALAENNAASLASLWVLLSGAAFVAFCVFAVRPAVEWLIRKTPEGETFSEFYISLILAGVMVSGFITDAIGTHSVFGAFVFGLVIPNGPLSFTLVEKLEDFVSGLLLPLFFAISGLKTNLALINGSYTWAILILVIFLACIGKVLGTLLIALLYQMPIREGAALGLLMNTKGLVEMVVLNVGKDQKVFDEESFAVMVVITVIMTAIIVPAISIIYRPSRSSIYYKRRTIEISKSNTEFRLLVCIHTPRNVPTMINLLEASNPSKNSPICAYVLHLVELSGRTSAMLIVHNTAKQDLPALNRTEAQSDHIIKAFENYEQHASFIAVQPLTAISPYSTMHEDICNLAADKRVALIIVPFHKQQTVDGGMEATNMAYRAINQNVLANAPCSVGILVDRGLSGSNRLAGNQVSHHIAVLFFGGPDDREALCYGWRMMEHPGISLTIMRFLPGEQAEPSCPQQDSNNMDGPRMLTVQTDRDIQKKLDEKLLEEFRMSCGSEDAVDYVEKVVNNGEDTVAAIRSMDDVHDLFVVGRGQGMISPLTAGLTDWSECPEMGAIGDLLASSDFAATASVLVVQQYVGQVYPGTETPNGDDYIDFSHCSTSPAAKVYS 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01143 831 FunFam Cation/H(+) antiporter 15 45 446 - -
Vian4g01143 831 Pfam Sodium/hydrogen exchanger family 53 431 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vian4g01143 831 Gene3D - 488 769 - -
Vian4g01143 831 Gene3D - 45 445 IPR038770 -
Vian4g01143 831 PANTHER CATION/H + ANTIPORTER 20 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01143 Vian-Chr4 19486015 19488994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01143 15 801 Antiporter Super Family AT2G13620 70.089 0.0 1135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01143 K26731 - gmx:100818927 1336.63