Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01109 ATGGGTGAACTAAAACCATATTTGGCAATGTTTGTGGTGCAATTGATATATTCAGGGCTAACCCTGCTATCTAAGGCTGTGTTTAACAGGGGAATGAATACCTTTGTGTTCATATTTTATAGACAGCTGATTGGTGCACTTGTTTTGGTTCCTCTGGCCTTCATACTTGAGAAAAAAACAGTAGTGTCAGTGTCACTTTCCTTTTCAACCTTCTGCAAGATTTTTGTGTCTTCATTTTTCGGAGTAACTTTGACTATAAATATGCAAGCTATTGCCCTTGTTTACACGTCTGCCACTTTGGCTGCTGCAATTGTCAATTCTCTCCCCGCATCTACGTTTTTCTTTGCTGTGCTGCTCAGAATGGAGAAGGTACATATAAGGACAAAAAGTGGAGTTACAAAGATAGCAAGTGTGTTCATGTGCCTGGTTGGTGTAGCCACCCTTGCTTTTTACAAGGGACCACAGTTAAGGATTGCTCATTACTACAATGATAAGAGTCCACATCATGAGGATCATTTTTCATCCAGCAAAAGATGGGTATTAGGCTCTGTAGTCTTGTTCATGAGCGTCATCATCTGGAGCATTTGGCTTGTAATTCAGGTAGATCCACTTGTGTTGCACATTTCTGCTATTCCAACTTATGCTAAACAAGTGTTAGTTTATAAGTTCATCTATGCTCACACTGATCCCAAAAAAGAGCAGGCTCAAATTCTTAAAAGCTACCCTGCAAAGCTGAAGTTCACGAGCCTTCAGTGCCTGTCAAGTTCAATCCAATCATTTTGTATTGCTATAGCTTTTGAAAGAGATATTGAGCAGTGGAAGTTGGGTTGGGACATGAAACTGCTTGCAGTTGTTTACTGTGGGACACTAGTGACTGGACTCATCTACTACTTGCAAGCTTGGGCTATCCAAAAGAGAGGACCAGTTTTTCCTGCGATGTGGAACCCGCTAAGTTTTGTCATTTCTACCACGGGTTCTATATTTCTCTTGGGCGAGCCCCTACTTTTGGGAAGTTCTAGAGTGGTTGAGGACCTCGAGTCTCTGGAGGCGCAAGAGCTTTGGGGGAAAGGTTTGGTTAAAGCCATTGTTGGAGAGGTTGGGGAAGCGGAGGGCAAAGAGGGAGGAGAGAGGCGGAGGGATGGGGCCGGAGAACTTATTGTTGGCGAGGGAGAGATTGGAGAGGAATGGAAGGTGAGCTACGTCGGCGGAGAGAGTCCTGGAGAGGTGGATACCACGATGTGGAGAGCGGACGTTTTTCTCTGTATTCCTCTTCTCTTCTTCCTTTTCCCCCATTTTCTTACTCTCATTCCCAACAACATCGTTTCCAAATACACAATCCTCCCCCAGCTTCCAGAGCTTTCTGCGTTTCCGAATGTCCACCGCACAGGCGCAGCCTCCGGTGAAGTCCCAGCCTCTGCACAACCGCTAGCTCCACCACCACAACCACTTCAGGCGCCGTCGTGCAACGATGAAACTAACGACGAAGCTGCGAAGCGCGACATCGAGGACGCCGAGGAGGCTGTGCAAAAGCCGTGGAACTTGCGACCCCGCAAACCCGCGCTCCCCAAGTCTGCGCTCGAGATCGGAACTGGTCCTTCACGGAACCACGCCAACAACGGCGCGGGAGAGTTTCACGACGCCGTTTCGAACCACGGCGAGAACCCCGCTCCGAAGTCCCTCCGGCTACGAGGGTTCACAGACACTCATTGCGCCGAGAAGAAGGAGAAGAGGAAATTCTGGATCGCTCTTTCTAGAGAAGAGATCGAAGAGGAAATTCTGGATCGCAAAAGCCCTATTTACTGA 1803 0.477 MGELKPYLAMFVVQLIYSGLTLLSKAVFNRGMNTFVFIFYRQLIGALVLVPLAFILEKKTVVSVSLSFSTFCKIFVSSFFGVTLTINMQAIALVYTSATLAAAIVNSLPASTFFFAVLLRMEKVHIRTKSGVTKIASVFMCLVGVATLAFYKGPQLRIAHYYNDKSPHHEDHFSSSKRWVLGSVVLFMSVIIWSIWLVIQVDPLVLHISAIPTYAKQVLVYKFIYAHTDPKKEQAQILKSYPAKLKFTSLQCLSSSIQSFCIAIAFERDIEQWKLGWDMKLLAVVYCGTLVTGLIYYLQAWAIQKRGPVFPAMWNPLSFVISTTGSIFLLGEPLLLGSSRVVEDLESLEAQELWGKGLVKAIVGEVGEAEGKEGGERRRDGAGELIVGEGEIGEEWKVSYVGGESPGEVDTTMWRADVFLCIPLLFFLFPHFLTLIPNNIVSKYTILPQLPELSAFPNVHRTGAASGEVPASAQPLAPPPQPLQAPSCNDETNDEAAKRDIEDAEEAVQKPWNLRPRKPALPKSALEIGTGPSRNHANNGAGEFHDAVSNHGENPAPKSLRLRGFTDTHCAEKKEKRKFWIALSREEIEEEILDRKSPIY 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01109 600 PANTHER WAT1-RELATED PROTEIN 6 342 IPR030184 GO:0016020|GO:0022857
Vian4g01109 600 MobiDBLite consensus disorder prediction 492 512 - -
Vian4g01109 600 SUPERFAMILY Multidrug resistance efflux transporter EmrE 273 334 - -
Vian4g01109 600 MobiDBLite consensus disorder prediction 464 524 - -
Vian4g01109 600 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 152 - -
Vian4g01109 600 Pfam EamA-like transporter family 5 132 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01109 Vian-Chr4 17930004 17936519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01109 5 287 Nodulin-like Gene Family AT5G64700 45.862 6.27e-69 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01109 - - vum:124822595 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01109 4 17930004 17936519 Vian4g01109 4 17930004 17936519 ECH