Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01108 ATGAAAGGAAACAATCCCTATTTGGTTGTGATTCTCATACAAGCCATATATGCTGCCATGTTTCTTCTCTCAAAAGCAGCATTCGATCATGGCATGAACAATTTCATCTTCGTCTTCTATAGACAGGCAATAGCAACCATCTTTTTGACCCCTTTCACTTTCCTCTTCGAATGGAAAACGGCACCTCCTATGCCCTTTTGGACCTTCTGCAAGATTTTCTTCCTTTCTTTCTTTGGGATCACTTTAAGCTTGGACGTATATGGTATCGGGCTTATTTACACCTCAGCAACTTTAGCTGCTGCTACCACAAACTGTCTTCCAGCTATCACCTTCTTCTTGGCACTCCTACTAAGGATTGAGAGTCTGAAAATAAAGACCACCTCAGGGATTGCTAAGTTGATAGGCATTGTGGCATGTTTGGGTGGTGCAGCAATCCTTGCCTTTTATAAAGGTCCTTCTTTAAGATTCTTAAGTCATTTTCACCTGTTGGATTATCACAAAGGCCTACAACATCAAGGTCATGCTCAATCGGGTGCATGGATAAAGGGTTGTTTCATCATGCTCCTCTCCAACACTTTCTTCGGGCTATGGCTTGTACTGCAGGCTTTTATTATAAAAGGGTACCCTTCAAAGCTACTCTTCACAACTATTCAGTGTTTCTTAAGCTCAATTCAGTCTTTGGTTATTGCCTTGGCAGTAGAAAGAGACTTTGAGCAATGGAAGTTGGGTTGGAATGTCAGACTCCTCGCAGTAATATACTGTGGTGAGAAAGTTGGTTTTGTTTATACGGAAACCACGCTTGATATTAATGGAATGATTGGTTTGATCAGTGTTCTTGGAGGATTGGTGTTGATTCTTGGACTGTACAGCGTGTTGTGGGGAAAGAACAGGGAACATATGCCAAAAGACACACAAGACGTGGAGCAACAGGCATCTGGAAAATGA 945 0.419 MKGNNPYLVVILIQAIYAAMFLLSKAAFDHGMNNFIFVFYRQAIATIFLTPFTFLFEWKTAPPMPFWTFCKIFFLSFFGITLSLDVYGIGLIYTSATLAAATTNCLPAITFFLALLLRIESLKIKTTSGIAKLIGIVACLGGAAILAFYKGPSLRFLSHFHLLDYHKGLQHQGHAQSGAWIKGCFIMLLSNTFFGLWLVLQAFIIKGYPSKLLFTTIQCFLSSIQSLVIALAVERDFEQWKLGWNVRLLAVIYCGEKVGFVYTETTLDINGMIGLISVLGGLVLILGLYSVLWGKNREHMPKDTQDVEQQASGK 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01108 314 PANTHER WAT1-RELATED PROTEIN 6 301 IPR030184 GO:0016020|GO:0022857
Vian4g01108 314 Pfam EamA-like transporter family 6 135 IPR000620 GO:0016020
Vian4g01108 314 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01108 Vian-Chr4 17883932 17887401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01108 1 254 Nodulin-like Gene Family AT5G64700 60.853 2.41e-98 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01108 - - gmx:100804562 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01108 4 17883932 17887401 Vian4g01108 4 17883932 17887401 ECH
Vian1g03631 1 59060738 59064029 Vian4g01108 4 17883932 17887401 PCT