LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian4g01097	ATGTCATATCGAAAGATAACTATCCTCCGCATCTATTCTGCCAACAACCCTCCCCAAATAGCATTTGCCTGCGCCTTCCCAACCCTAATCTTCAAGCTCTTGGGCTTTGACGACCCCGCTTCCGCCAATGCCTGGATCCACCACCGCCACTCCCACGACCTCGCCCCAATCCTCTTCTCCCTACTCTCCCCCAACACCCTTGCCTCCGCCATTGCCGCTGTCGACCGCCTCTCCCTCATCAAATACATAGAAGCCAGAGTGGGGATTAGGATTTTTGCCGAAGAACTCGACCGCTTCGAAGCCGCGGAGAAAGTGATTCTTGTCGTCGTATCCCTCTCCGACCAGCCTTCGCGCCAATCCACTTCTCTCTTCAACCCTCATAACAATCCCGCTGAGTACTTTTCCACGGTTGATGAGATCATCCACTGGATGGACCAGTTTTCGATCACACCACCCTCCTCCGCCGTGGGACGCATAAGGCCCGCCATCGTGGACCGGGCAGAGAACACAATTCAACTTGCGATGTCGCGACTGAAGGAAAAGATGTGGCACGTGCTGATTTGCAACACAATCCCACTTGACGCCGTGAGCCGCTACGGTTCAATAAGGAGGGTTTCGCTCTCGTTCGGCTCGTACGACGGTGCCATCGACGATACCCTAGAGAGCTTCGGTGAGGTCGGCTCGAGTCGCTTCCATGAGCGAGATGCTCTGGATGAGTGTTTAGTCATTCTGGGTGTTGAGCGGCTGAGTATTGAAGAGGTTCAGAGGAGAGAAGCATGA	780	0.5449	MSYRKITILRIYSANNPPQIAFACAFPTLIFKLLGFDDPASANAWIHHRHSHDLAPILFSLLSPNTLASAIAAVDRLSLIKYIEARVGIRIFAEELDRFEAAEKVILVVVSLSDQPSRQSTSLFNPHNNPAEYFSTVDEIIHWMDQFSITPPSSAVGRIRPAIVDRAENTIQLAMSRLKEKMWHVLICNTIPLDAVSRYGSIRRVSLSFGSYDGAIDDTLESFGEVGSSRFHERDALDECLVILGVERLSIEEVQRREA	259

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian4g01097	259	SUPERFAMILY	Cullin repeat-like	122	257	IPR016159	-
	Vian4g01097	259	PANTHER	ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN 24, MITOCHONDRIAL	17	83	-	-
	Vian4g01097	259	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	24	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian4g01097	Vian-Chr4	17711678	17713937	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian4g01097	131	256	EXO70 exocyst subunit family	AT5G50380	37.222	6.87e-23	95.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian4g01097	K07195		-	gmx:100809716	238.424