Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01075 ATGGACCCTTTCCACCATCGCCGCCGCCACCGCCGCCGCACCTGGTGCTGCTCCTTCGCAGTCCCTCCCTCCAGTCCCGACAACATCACCGCTTCCAAACCTCTTCCCCCTCGCAAGCCCGAACCCAACTCTAAACCCACTTTCTCCCTCCCGACCTCCCCCAAATCCCGCATCCCCGCTCGGATCGACCCTCGCCGTATCCTCTCTCCGGGAAGAGTCTCCCCCATTGACTCCGATCCCGTAGCCGCTACCTCCGCTCCCTCCCCCTCTCCGGAACCGCCGCTTCCACGATCTCCGGCACCGGTAGCCGGCGATAGGGATGTGAGGATGAGTCTGAGAGGGAAGAACGGCGGGTGCGTGGTTCTGGAGGTGAACTCCGGGGTTTTGTGCGCGAATTCCGAAGTGTTCGCGGGGTTGATAGAGGATTACAAGAAAGGGGCTGCGTCTTGGAGTGGGAGTAACAAAATGTGTAGAATAGAGGTTCCTGAAGTTGAGAACTTGGGCGTGTTCAGAGAGACAATTGAGCTCATGTTTGAAAACGACGATTGCCTCACCAAACGACTTCTTAACATCGGCGTTTTTCGATGCATTGACGTTTTGGAGGTTTCAGCAGGCATCATGTTCACCAAGGGTGTTTTGTCGTGTTTGCAATACCTCGAAGCTGTGCCTTGGACTGAAGAAGAAGAAGAAAAATTGAGAAGCCTATTCACAAGATTTAAGTTTGATGAAGCAACAACGAGAGACATCCTAGGAAGGCTTTACTTGCACGACTCAGCAGATTGCTCTAACCAGTCAAACATAGCTCGACAGCTTGTCTGGTCTATCATAACTTGTGTGGATGTCAATGCTAGAAATGAACTAAAATCACTGGTGAAGGGTCTTCTTTGCAAAAGCTCGGTGTATGAGAAGAATCATCTTGACCTCAACAAAGACGATCTGTATTCTGTTGGCCACGCATGTTTGGACTCACTGTTAAGCCTCTTTGAGGAGGCATCAGATACCATCCCCTCTGAAAACTTAACAAAGAAAGATAAGAATAAGCCACTAATTGAACGCATCTCAAGGCAGGTTGATAACATAAATTGGTTGTTGGAAATCATGCTTGATGGGCAAATAGCAGAGGACTTTGTGAACATATGGGCAGATCAGCACCAACTTGTTAAAATGCATGATAGTGCATCCCCAATGATTAGATATGAACTAAGTCGTGTGTCAGCAATTCTCTTTATTGCCATGGCTACTAGAAAATTGCAATGCCGGTTGGAAGCACGATCAGGGCTTCTTCAGGCATGGTTCCGGCCGATGTTATTGGACTTTGGTTGGCTTCAGAGATGCAGAAGAGGACTTGATATAAAGGTTTTGCAAGAGGCTATGGGTCAAACACTTCTTACTCTACCTCTAAATCAACAGTACATGCTCTTCATGGAATGGTTTCGACACTTCTCAAGCCATGGCACCGAGTGTCCAAATCTAAGCAAGGCATTTCAAATTTGGTGGCGCAGGTCATTCTTAAGAGGCTCTGAAACTCATGCCATTGAGTCAAGGTAA 1548 0.4858 MDPFHHRRRHRRRTWCCSFAVPPSSPDNITASKPLPPRKPEPNSKPTFSLPTSPKSRIPARIDPRRILSPGRVSPIDSDPVAATSAPSPSPEPPLPRSPAPVAGDRDVRMSLRGKNGGCVVLEVNSGVLCANSEVFAGLIEDYKKGAASWSGSNKMCRIEVPEVENLGVFRETIELMFENDDCLTKRLLNIGVFRCIDVLEVSAGIMFTKGVLSCLQYLEAVPWTEEEEEKLRSLFTRFKFDEATTRDILGRLYLHDSADCSNQSNIARQLVWSIITCVDVNARNELKSLVKGLLCKSSVYEKNHLDLNKDDLYSVGHACLDSLLSLFEEASDTIPSENLTKKDKNKPLIERISRQVDNINWLLEIMLDGQIAEDFVNIWADQHQLVKMHDSASPMIRYELSRVSAILFIAMATRKLQCRLEARSGLLQAWFRPMLLDFGWLQRCRRGLDIKVLQEAMGQTLLTLPLNQQYMLFMEWFRHFSSHGTECPNLSKAFQIWWRRSFLRGSETHAIESR 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01075 515 MobiDBLite consensus disorder prediction 29 44 - -
Vian4g01075 515 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 105 506 IPR038920 -
Vian4g01075 515 MobiDBLite consensus disorder prediction 1 15 - -
Vian4g01075 515 MobiDBLite consensus disorder prediction 1 105 - -
Vian4g01075 515 MobiDBLite consensus disorder prediction 86 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01075 Vian-Chr4 17251404 17253577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01075 - - gmx:100777771 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01075 4 17251404 17253577 Vian4g01075 4 17251404 17253577 ECH
Vian1g03662 1 59419309 59421410 Vian4g01075 4 17251404 17253577 PCT
Vian1g03852 1 61579532 61581845 Vian4g01075 4 17251404 17253577 PCT