Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01060 ATGAAGGTGAAGAAAGGGTTCTTGGCCGTTCAAGTGGGGTTAGAAGACGAGGACCAAGGTGGTTCCTCTTCTCAGAGATTTGTCATTCCCATCTCATACCTTTACCACCCTCTCTTCAAGCGTCTTCTCGACAAAGCTCACGAGGTCTACGGCTACCACACCGATGGCCCCCTCAAGCTGCCCTGCTCCGTCGACGATTTTCTCCATCTCCGTTGGCGTATCGAAAAGGAGTCAACTTCCGATCAACACCACCATAACCATACCAACCATCGCCTTCCACACGCTTTGCACTTTCACTCCTGTTGA 306 0.5131 MKVKKGFLAVQVGLEDEDQGGSSSQRFVIPISYLYHPLFKRLLDKAHEVYGYHTDGPLKLPCSVDDFLHLRWRIEKESTSDQHHHNHTNHRLPHALHFHSC 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01060 101 Pfam Auxin responsive protein 3 73 IPR003676 GO:0009733
Vian4g01060 101 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 70 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01060 Vian-Chr4 16916580 16916885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01060 3 86 Calmodulin-binding Proteins AT3G43120 41.667 7.38e-14 61.6