Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01035 ATGAAGTGGCCAACATGGAAGTCCAGCACCATGGTAATGGGTGTGGTGTTCCTTTATCTGAGTTTTTCCTTGGAGGTGTTCTGTGACCCTTCTCATGCAGACAGAATTGCTGAGCTTCCTGGCCAACCCTACGTAGGCTTTCAACAGTTCTCTGGGTATGTCACAGTGGATGACAAGAAACACAAGTCTCTCTTTTACTATTTTGCTGAGTCAGAAACTAATCCAGCTTCAAAGCCTCTTGTTTTGTGGCTCAATGGAGGACCTGGTTGTTCTTCACTGGGAGTGGGAGCATTCTCAGAAAATGGACCTTTCAGACCAAACGGAGAATTTCTGATTAAAAATTATTATAGTTGGAACAAAGAGGCAAACATGCTGTATTTGGAGACACCGGTTGGAGTGGGGTTCTCTTACGCTAAAGGTAGCTCCTCATATATGACAGTGAATGACGAGGCAACAGCAATAGAAGAAGGTATATCAGGACAATCTTCTATTCCTGCTACGCTGGTTCAACAAGTTCCCCCAATACAGGACCAGAGATTTGTTTCTAACGGGGGAAAGCTATGCAGATTTCAAAAGTTGCATGTATCAGGTCATTATGTTCCTCAACTTGCGAAGCTCATGATTGAAATGAACACAAGGAAAAAGATATTCAATCTGAAAGGCATTGCGTTGGGTAATCCAGTTCTAGAATATGCCACTGACTTCAATTCAAGAGCTGAGTTCTTCTGGTCTCATGGACTGATATCAGATTCAACCTACAACATATTCACTACAGTGTGCAACTATTCTAGGTACGTTAGTGAGTACTATAGGGACTCAATTTCGCCTCTTTGTTCAAAGGTTATGGGCCAAGTGAGCAGAGAAACAAGTAAATTTGTGGACAAATATGATGTCACACTTGATGTTTGCATTTCCTCAGTGCTATCACAATCCAAGGTTATTTCTCCTAAAACCCAAGAAGCAAGTGAGAGAATAGATGTGTGTGTGGATGACAAGGTTACAAACTACTTAAACCGGAGAGACGTACAAGAATCACTTCATGCAAAGCTCGTTGGAGTTCGCAAGTGGGATGTTTGCAGCAATAAACAATGTAATCACTTGACTGCATTTCTTGGTTCCAGCGTGCTGAACTATGATATGCTCAACCTGGAAGTGCCTACACTACCTGTTGTTGGATCACTCATAAAAGCTGGAGTCAGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTGACTGGAAGCCGTACCTTAGTTCAGAAGTTGGCAAGTCAATTAGGACTGAATACAACAGTCCCTTACAGAGTATGGTTTGAAGGTCAGCAGGTTGGTGGGTGGACTCAAGTTCATGGAAATATCCTCTCATTTGCGACTGTTAGAGGTGCCTCCCATGAAGTTCCTTTCTCACAACCTCAAAGATCACTTGTACTATTCAAGTCATTCTTGAAAGGCGTACCTTTACCTGAAGTCTTTTGA 1482 0.4231 MKWPTWKSSTMVMGVVFLYLSFSLEVFCDPSHADRIAELPGQPYVGFQQFSGYVTVDDKKHKSLFYYFAESETNPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLIKNYYSWNKEANMLYLETPVGVGFSYAKGSSSYMTVNDEATAIEEGISGQSSIPATLVQQVPPIQDQRFVSNGGKLCRFQKLHVSGHYVPQLAKLMIEMNTRKKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYNIFTTVCNYSRYVSEYYRDSISPLCSKVMGQVSRETSKFVDKYDVTLDVCISSVLSQSKVISPKTQEASERIDVCVDDKVTNYLNRRDVQESLHAKLVGVRKWDVCSNKQCNHLTAFLGSSVLNYDMLNLEVPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLASQLGLNTTVPYRVWFEGQQVGGWTQVHGNILSFATVRGASHEVPFSQPQRSLVLFKSFLKGVPLPEVF 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01035 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 456 469 IPR001563 GO:0004185|GO:0006508
Vian4g01035 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Vian4g01035 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Vian4g01035 493 SUPERFAMILY alpha/beta-Hydrolases 31 489 IPR029058 -
Vian4g01035 493 FunFam Carboxypeptidase 29 490 - -
Vian4g01035 493 Gene3D - 387 486 - -
Vian4g01035 493 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 473 IPR001563 GO:0004185|GO:0006508
Vian4g01035 493 ProSitePatterns Serine carboxypeptidases, histidine active site. 456 473 IPR033124 GO:0004185
Vian4g01035 493 Gene3D alpha/beta hydrolase 28 315 IPR029058 -
Vian4g01035 493 Gene3D - 328 362 - -
Vian4g01035 493 Pfam Serine carboxypeptidase 196 486 IPR001563 GO:0004185|GO:0006508
Vian4g01035 493 Pfam Serine carboxypeptidase 41 153 IPR001563 GO:0004185|GO:0006508
Vian4g01035 493 FunFam Carboxypeptidase 387 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01035 Vian-Chr4 16136135 16139248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01035 336 489 Calmodulin-binding Proteins AT2G22960 24.675 3.63e-12 63.5